RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 NOGQ13253 232 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 GRM1Q13255 1194 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 USH1GQ495M9 461 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 MCTP2Q6DN12 878 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
PFDN1-204ENST00000512707 CUL5Q93034 780 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 ABHD8Q96I13 439 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 PHF20Q9BVI0 1012 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 MTMR6Q9Y217 621 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 PTPRFP10586 1907 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 MYH6P13533 1939 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 SMCO2A6NFE2 343 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 SPDYE16A6NNV3 312 aaPredicted RBP12.46□□□□□ -0.41
PFDN1-204ENST00000512707 BTBD19C9JJ37 291 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 BRD1O95696 1058 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 F13A1P00488 732 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 COPB2P35606 906 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 SNAP25P60880 206 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 HERVK_113P62684 666 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 MOGSQ13724 837 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 PLS1Q14651 629 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 TKFCQ3LXA3 575 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 GPAT2Q6NUI2 795 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 LBX2Q6XYB7 198 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 BRAPQ7Z569 592 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 MCF2L2Q86YR7 1114 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 DIS3L2Q8IYB7 885 aaKnown RBP12.46□□□□□ -0.41
PFDN1-204ENST00000512707 CPXCR1Q8N123 301 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 BRI3BPQ8WY22 251 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 COA7Q96BR5 231 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 TEX13BQ9BXU2 312 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 ZMYND12Q9H0C1 365 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 FOXP1Q9H334 677 aaPredicted RBP12.46□□□□□ -0.41
PFDN1-204ENST00000512707 PSTPIP2Q9H939 334 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 ADAMTS5Q9UNA0 930 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 KCNJ14Q9UNX9 436 aa12.46□□□□□ -0.41
PFDN1-204ENST00000512707 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
PFDN1-204ENST00000512707 ATP2A1O14983 1001 aa12.45□□□□□ -0.42
PFDN1-204ENST00000512707 SLC34A2O95436 690 aa12.45□□□□□ -0.42
PFDN1-204ENST00000512707 GCLCP48506 637 aaPredicted RBP12.45□□□□□ -0.42
PFDN1-204ENST00000512707 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
PFDN1-204ENST00000512707 SNRNP48Q6IEG0 339 aaKnown RBP12.45□□□□□ -0.42
PFDN1-204ENST00000512707 BLIDQ8IZY5 108 aa12.45□□□□□ -0.42
PFDN1-204ENST00000512707 REXO1Q8N1G1 1221 aaKnown RBP12.45□□□□□ -0.42
PFDN1-204ENST00000512707 DAGLBQ8NCG7 672 aa12.45□□□□□ -0.42
PFDN1-204ENST00000512707 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
PFDN1-204ENST00000512707 CAPNS2Q96L46 248 aa12.45□□□□□ -0.42
PFDN1-204ENST00000512707 P2RX7Q99572 595 aaKnown RBP12.45□□□□□ -0.42
PFDN1-204ENST00000512707 RAVER2Q9HCJ3 691 aaKnown RBP12.45□□□□□ -0.42
PFDN1-204ENST00000512707 RIC8AQ9NPQ8 531 aa12.45□□□□□ -0.42
PFDN1-204ENST00000512707 RABGAP1Q9Y3P9 1069 aa12.45□□□□□ -0.42
PFDN1-204ENST00000512707 CCDC194A0A1B0GVG4 234 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 PPP1R11O60927 126 aaPredicted RBP12.44□□□□□ -0.42
PFDN1-204ENST00000512707 ALDH1A1P00352 501 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 ALAS1P13196 640 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 STAT3P40763 770 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 CCNA1P78396 465 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 KIF23Q02241 960 aaPredicted RBP12.44□□□□□ -0.42
PFDN1-204ENST00000512707 PKP1Q13835 747 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 KRT25Q7Z3Z0 450 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 FERMT3Q86UX7 667 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 NOSTRINQ8IVI9 506 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 CCAR1Q8IX12 1150 aaKnown RBP12.44□□□□□ -0.42
PFDN1-204ENST00000512707 SAMD3Q8N6K7 520 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 AGBL1Q96MI9 1066 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 PAGR1Q9BTK6 254 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 MAF1Q9H063 256 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 EHMT1Q9H9B1 1298 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 GJB4Q9NTQ9 266 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 FBXO40Q9UH90 709 aa12.44□□□□□ -0.42
PFDN1-204ENST00000512707 NOL7Q9UMY1 257 aaKnown RBP12.44□□□□□ -0.42
PFDN1-204ENST00000512707 FAM155AB1AL88 458 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-204ENST00000512707 SLC25A27O95847 323 aa12.43□□□□□ -0.42
PFDN1-204ENST00000512707 FOSP01100 380 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-204ENST00000512707 U2AF2P26368 475 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■■■□□ 17.7
PFDN1-204ENST00000512707 TMEM132BQ14DG7 1078 aa12.43□□□□□ -0.42
PFDN1-204ENST00000512707 TAF1CQ15572 869 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-204ENST00000512707 CYP4F22Q6NT55 531 aa12.43□□□□□ -0.42
PFDN1-204ENST00000512707 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
PFDN1-204ENST00000512707 CHST13Q8NET6 341 aa12.43□□□□□ -0.42
PFDN1-204ENST00000512707 ZNF396Q96N95 335 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-204ENST00000512707 TRERF1Q96PN7 1200 aa12.43□□□□□ -0.42
PFDN1-204ENST00000512707 GBP4Q96PP9 640 aa12.43□□□□□ -0.42
PFDN1-204ENST00000512707 HOMER2Q9NSB8 354 aa12.43□□□□□ -0.42
PFDN1-204ENST00000512707 MAP3K20Q9NYL2 800 aaKnown RBP12.43□□□□□ -0.42
PFDN1-204ENST00000512707 ZNF214Q9UL59 606 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-204ENST00000512707 ZNF536O15090 1300 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 CASP8AP2Q9UKL3 1982 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 SPDYE3A6NKU9 549 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 BTBD18B2RXH4 712 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 GCOM1H8Y6P7 765 aaPredicted RBP12.42□□□□□ -0.42
PFDN1-204ENST00000512707 POLR2MP0CAP2 368 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 CYP2C8P10632 490 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 RESTQ13127 1097 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 AP3B2Q13367 1082 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 ATL3Q6DD88 541 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 TYW1BQ6NUM6 668 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 FAM43AQ8N2R8 423 aa12.42□□□□□ -0.42
PFDN1-204ENST00000512707 REPS2Q8NFH8 660 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms