RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 ASTN1O14525 1302 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 PATL2C9JE40 543 aaKnown RBP21.38■■□□□ 1.01
CLDND1-217ENST00000508071 M0R2C6 588 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 SLC3A2P08195 630 aaKnown RBP21.38■■□□□ 1.01
CLDND1-217ENST00000508071 ITGA7Q13683 1181 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 CCDC85BQ15834 202 aaPredicted RBP21.38■■□□□ 1.01
CLDND1-217ENST00000508071 TKFCQ3LXA3 575 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 STAG1Q8WVM7 1258 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 AGBL1Q96MI9 1066 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 ASB2Q96Q27 587 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 SEZ6LQ9BYH1 1024 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 NACAP1Q9BZK3 213 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 NKX2-4Q9H2Z4 354 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 SLC28A3Q9HAS3 691 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 GNEQ9Y223 722 aaKnown RBP21.38■■□□□ 1.01
CLDND1-217ENST00000508071 CHD7Q9P2D1 2997 aa21.38■■□□□ 1.01
CLDND1-217ENST00000508071 SOWAHBA6NEL2 793 aa21.37■■□□□ 1.01
CLDND1-217ENST00000508071 DYNC1LI2O43237 492 aaPredicted RBP21.37■■□□□ 1.01
CLDND1-217ENST00000508071 ADGRE1Q14246 886 aa21.37■■□□□ 1.01
CLDND1-217ENST00000508071 LRRFIP1Q32MZ4 808 aaKnown RBP21.37■■□□□ 1.01
CLDND1-217ENST00000508071 IFNL3Q8IZI9 196 aa21.37■■□□□ 1.01
CLDND1-217ENST00000508071 TRERF1Q96PN7 1200 aa21.37■■□□□ 1.01
CLDND1-217ENST00000508071 ZNF536O15090 1300 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 UMODL1Q5DID0 1318 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 LRRC37A2A6NM11 1700 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 ALAS1P13196 640 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 COL9A1P20849 921 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 SLC1A4P43007 532 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 MRPS5P82675 430 aaKnown RBP21.36■■□□□ 1.01
CLDND1-217ENST00000508071 TFAP4Q01664 338 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 TSHZ3Q63HK5 1081 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 OTOP2Q7RTS6 562 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 MIER1Q8N108 512 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 IL27Q8NEV9 243 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 CHMP4CQ96CF2 233 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 GMCL1Q96IK5 515 aa21.36■■□□□ 1.01
CLDND1-217ENST00000508071 SMPD1P17405 629 aa21.35■■□□□ 1.01
CLDND1-217ENST00000508071 MCCP23508 829 aa21.35■■□□□ 1.01
CLDND1-217ENST00000508071 CCL23P55773 120 aa21.35■■□□□ 1.01
CLDND1-217ENST00000508071 PPP4R3BQ5MIZ7 849 aa21.35■■□□□ 1.01
CLDND1-217ENST00000508071 RPUSD2Q8IZ73 545 aaKnown RBP21.35■■□□□ 1.01
CLDND1-217ENST00000508071 NOC4LQ9BVI4 516 aaKnown RBP21.35■■□□□ 1.01
CLDND1-217ENST00000508071 TRPV6Q9H1D0 765 aa21.35■■□□□ 1.01
CLDND1-217ENST00000508071 YBX2Q9Y2T7 364 aaKnown RBP21.35■■□□□ 1.01
CLDND1-217ENST00000508071 IQSEC1Q6DN90 963 aa21.34■■□□□ 1.01
CLDND1-217ENST00000508071 ADAMTS19Q8TE59 1207 aa21.34■■□□□ 1.01
CLDND1-217ENST00000508071 NAPBQ9H115 298 aa21.34■■□□□ 1.01
CLDND1-217ENST00000508071 PDGFCQ9NRA1 345 aa21.34■■□□□ 1.01
CLDND1-217ENST00000508071 Q9Y3F1 56 aa21.34■■□□□ 1.01
CLDND1-217ENST00000508071 SLC4A7Q9Y6M7 1214 aa21.34■■□□□ 1.01
CLDND1-217ENST00000508071 GRIN2DO15399 1336 aa21.33■■□□□ 1.01
CLDND1-217ENST00000508071 B4GALT4O60513 344 aa21.33■■□□□ 1.01
CLDND1-217ENST00000508071 PLA2G6O60733 806 aa21.33■■□□□ 1.01
CLDND1-217ENST00000508071 PPARAQ07869 468 aa21.33■■□□□ 1.01
CLDND1-217ENST00000508071 EEPD1Q7L9B9 569 aa21.33■■□□□ 1.01
CLDND1-217ENST00000508071 FBXO16Q8IX29 292 aaPredicted RBP21.33■■□□□ 1.01
CLDND1-217ENST00000508071 TSPYL2Q9H2G4 693 aaPredicted RBP21.33■■□□□ 1.01
CLDND1-217ENST00000508071 CYP39A1Q9NYL5 469 aa21.33■■□□□ 1.01
CLDND1-217ENST00000508071 DDX49Q9Y6V7 483 aaKnown RBP21.33■■□□□ 1.01
CLDND1-217ENST00000508071 PTGS1P23219 599 aa21.32■■□□□ 1
CLDND1-217ENST00000508071 SNAP25P60880 206 aa21.32■■□□□ 1
CLDND1-217ENST00000508071 PSMC6P62333 389 aa21.32■■□□□ 1
CLDND1-217ENST00000508071 TAPT1Q6NXT6 567 aa21.32■■□□□ 1
CLDND1-217ENST00000508071 KCTD1Q719H9 257 aa21.32■■□□□ 1
CLDND1-217ENST00000508071 UHRF1Q96T88 793 aaPredicted RBP21.32■■□□□ 1
CLDND1-217ENST00000508071 WNT8AQ9H1J5 351 aa21.32■■□□□ 1
CLDND1-217ENST00000508071 VTA1Q9NP79 307 aa21.32■■□□□ 1
CLDND1-217ENST00000508071 RCAN3Q9UKA8 241 aa21.32■■□□□ 1
CLDND1-217ENST00000508071 STX8Q9UNK0 236 aa21.32■■□□□ 1
CLDND1-217ENST00000508071 ZBBXA8MT70 800 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 RABGGTBP53611 331 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 MUM1L1Q5H9M0 696 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 PPP2R2DQ66LE6 453 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 RCSD1Q6JBY9 416 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 NSMFQ6X4W1 530 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 KIAA1211Q6ZU35 1233 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 SEC62Q99442 399 aaKnown RBP21.31■■□□□ 1
CLDND1-217ENST00000508071 DCTPP1Q9H773 170 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 CCPG1Q9ULG6 757 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 PRR12Q9ULL5 1215 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 TRANK1O15050 2925 aa21.31■■□□□ 1
CLDND1-217ENST00000508071 LCTP09848 1927 aa21.3■■□□□ 1
CLDND1-217ENST00000508071 TSPY2A6NKD2 308 aa21.3■■□□□ 1
CLDND1-217ENST00000508071 C20orf194Q5TEA3 1177 aa21.3■■□□□ 1
CLDND1-217ENST00000508071 MICALL1Q8N3F8 863 aa21.3■■□□□ 1
CLDND1-217ENST00000508071 SCLYQ96I15 445 aa21.3■■□□□ 1
CLDND1-217ENST00000508071 ALDH8A1Q9H2A2 487 aaPredicted RBP21.3■■□□□ 1
CLDND1-217ENST00000508071 PCDHA11Q9Y5I1 949 aa21.3■■□□□ 1
CLDND1-217ENST00000508071 REV3LO60673 3130 aa21.3■■□□□ 1
CLDND1-217ENST00000508071 SUPT20HL2P0C7V6 817 aa21.29■■□□□ 1
CLDND1-217ENST00000508071 FSD1Q9BTV5 496 aa21.29■■□□□ 1
CLDND1-217ENST00000508071 MTMR7Q9Y216 660 aa21.29■■□□□ 1
CLDND1-217ENST00000508071 ERC2O15083 957 aa21.28■■□□□ 1
CLDND1-217ENST00000508071 PFKMP08237 780 aa21.28■■□□□ 1
CLDND1-217ENST00000508071 MYOGP15173 224 aa21.28■■□□□ 1
CLDND1-217ENST00000508071 ATP2A2P16615 1042 aaKnown RBP21.28■■□□□ 1
CLDND1-217ENST00000508071 DUSP28Q4G0W2 176 aa21.28■■□□□ 1
CLDND1-217ENST00000508071 TMEM63BQ5T3F8 832 aa21.28■■□□□ 1
CLDND1-217ENST00000508071 MORC4Q8TE76 937 aa21.28■■□□□ 1
CLDND1-217ENST00000508071 POLR3EQ9NVU0 708 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms