RNA–Protein interactions for RNA: ENST00000505971.5

TRIO-207, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-207ENST00000505971 ICAM1P05362 532 aa24.06■■□□□ 1.44
TRIO-207ENST00000505971 SNAP25P60880 206 aa24.06■■□□□ 1.44
TRIO-207ENST00000505971 CCDC174Q6PII3 467 aa24.06■■□□□ 1.44
TRIO-207ENST00000505971 ZNF589Q86UQ0 364 aaPredicted RBP24.06■■□□□ 1.44
TRIO-207ENST00000505971 MORC4Q8TE76 937 aa24.06■■□□□ 1.44
TRIO-207ENST00000505971 TMEM47Q9BQJ4 181 aa24.06■■□□□ 1.44
TRIO-207ENST00000505971 ISY1Q9ULR0 285 aaKnown RBP24.06■■□□□ 1.44
TRIO-207ENST00000505971 LRRC37A2A6NM11 1700 aa24.06■■□□□ 1.44
TRIO-207ENST00000505971 MROH7Q68CQ1 1323 aa24.06■■□□□ 1.44
TRIO-207ENST00000505971 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.05■■□□□ 1.44
TRIO-207ENST00000505971 ARVCFO00192 962 aa24.05■■□□□ 1.44
TRIO-207ENST00000505971 TOP1P11387 765 aaKnown RBP24.05■■□□□ 1.44
TRIO-207ENST00000505971 TNFAIP2Q03169 654 aa24.05■■□□□ 1.44
TRIO-207ENST00000505971 FPGSQ05932 587 aa24.05■■□□□ 1.44
TRIO-207ENST00000505971 NMIQ13287 307 aaPredicted RBP24.05■■□□□ 1.44
TRIO-207ENST00000505971 TTBK2Q6IQ55 1244 aa24.05■■□□□ 1.44
TRIO-207ENST00000505971 FAM161BQ96MY7 647 aa24.05■■□□□ 1.44
TRIO-207ENST00000505971 TAPT1Q6NXT6 567 aa24.04■■□□□ 1.44
TRIO-207ENST00000505971 FAM126BQ8IXS8 530 aa24.04■■□□□ 1.44
TRIO-207ENST00000505971 SLC43A3Q8NBI5 491 aa24.04■■□□□ 1.44
TRIO-207ENST00000505971 LNPKQ9C0E8 428 aa24.04■■□□□ 1.44
TRIO-207ENST00000505971 TTYH1Q9H313 450 aaPredicted RBP24.04■■□□□ 1.44
TRIO-207ENST00000505971 PRUNE2Q8WUY3 3088 aa24.03■■□□□ 1.44
TRIO-207ENST00000505971 A0A0U1RQG5 324 aaPredicted RBP24.03■■□□□ 1.44
TRIO-207ENST00000505971 PCP11498 1178 aaKnown RBP24.03■■□□□ 1.44
TRIO-207ENST00000505971 MFSD5Q6N075 450 aa24.03■■□□□ 1.44
TRIO-207ENST00000505971 TTC14Q96N46 770 aa24.03■■□□□ 1.44
TRIO-207ENST00000505971 CDX2Q99626 313 aaPredicted RBP24.03■■□□□ 1.44
TRIO-207ENST00000505971 OSBPL3Q9H4L5 887 aa24.03■■□□□ 1.44
TRIO-207ENST00000505971 CCPG1Q9ULG6 757 aa24.03■■□□□ 1.44
TRIO-207ENST00000505971 Q9Y3F1 56 aa24.03■■□□□ 1.44
TRIO-207ENST00000505971 CD4P01730 458 aa24.02■■□□□ 1.44
TRIO-207ENST00000505971 SMPD1P17405 629 aa24.02■■□□□ 1.44
TRIO-207ENST00000505971 SLC16A2P36021 539 aa24.02■■□□□ 1.44
TRIO-207ENST00000505971 IQSEC1Q6DN90 963 aa24.02■■□□□ 1.44
TRIO-207ENST00000505971 RNPC3Q96LT9 517 aaKnown RBP24.02■■□□□ 1.44
TRIO-207ENST00000505971 DDX49Q9Y6V7 483 aaKnown RBP24.02■■□□□ 1.44
TRIO-207ENST00000505971 CCDC171Q6TFL3 1326 aa24.02■■□□□ 1.44
TRIO-207ENST00000505971 TMEM265A0A087WTH1 108 aa24.01■■□□□ 1.43
TRIO-207ENST00000505971 SNHG28P0DPA3 235 aa24.01■■□□□ 1.43
TRIO-207ENST00000505971 PDHBP11177 359 aa24.01■■□□□ 1.43
TRIO-207ENST00000505971 BEX3Q00994 111 aa24.01■■□□□ 1.43
TRIO-207ENST00000505971 CCDC96Q2M329 555 aa24.01■■□□□ 1.43
TRIO-207ENST00000505971 AKNAD1Q5T1N1 836 aa24.01■■□□□ 1.43
TRIO-207ENST00000505971 SYDE2Q5VT97 1194 aa24.01■■□□□ 1.43
TRIO-207ENST00000505971 C16orf59Q7L2K0 433 aa24.01■■□□□ 1.43
TRIO-207ENST00000505971 PURBQ96QR8 312 aaKnown RBP24.01■■□□□ 1.43
TRIO-207ENST00000505971 PDGFCQ9NRA1 345 aa24.01■■□□□ 1.43
TRIO-207ENST00000505971 MTMR7Q9Y216 660 aa24.01■■□□□ 1.43
TRIO-207ENST00000505971 LOC102724159A0A0B4J2E5 919 aa24■■□□□ 1.43
TRIO-207ENST00000505971 CABYRO75952 493 aa24■■□□□ 1.43
TRIO-207ENST00000505971 PWP2Q15269 919 aaKnown RBP24■■□□□ 1.43
TRIO-207ENST00000505971 RRP12Q5JTH9 1297 aaKnown RBP24■■□□□ 1.43
TRIO-207ENST00000505971 TLK2Q86UE8 772 aa24■■□□□ 1.43
TRIO-207ENST00000505971 PLEKHM2Q8IWE5 1019 aa24■■□□□ 1.43
TRIO-207ENST00000505971 VTA1Q9NP79 307 aa24■■□□□ 1.43
TRIO-207ENST00000505971 TOMM22Q9NS69 142 aa24■■□□□ 1.43
TRIO-207ENST00000505971 SDSP20132 328 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 HAND2P61296 217 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 BAATQ14032 418 aaPredicted RBP23.99■■□□□ 1.43
TRIO-207ENST00000505971 FSCN1Q16658 493 aaKnown RBP23.99■■□□□ 1.43
TRIO-207ENST00000505971 TMEM63BQ5T3F8 832 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 RASIP1Q5U651 963 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 CXCL17Q6UXB2 119 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 NSMFQ6X4W1 530 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 MFSD6Q6ZSS7 791 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 CLEC4DQ8WXI8 215 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 VTI1AQ96AJ9 217 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.99■■□□□ 1.43
TRIO-207ENST00000505971 RWDD1Q9H446 243 aaPredicted RBP23.99■■□□□ 1.43
TRIO-207ENST00000505971 GRIN2DO15399 1336 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 VCANP13611 3396 aa23.99■■□□□ 1.43
TRIO-207ENST00000505971 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.98■■□□□ 1.43
TRIO-207ENST00000505971 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.98■■□□□ 1.43
TRIO-207ENST00000505971 TRIM6-TRIM34B2RNG4 842 aa23.98■■□□□ 1.43
TRIO-207ENST00000505971 NFIBO00712 420 aa23.98■■□□□ 1.43
TRIO-207ENST00000505971 DYNC1LI2O43237 492 aaPredicted RBP23.98■■□□□ 1.43
TRIO-207ENST00000505971 IGHDP01880 384 aa23.98■■□□□ 1.43
TRIO-207ENST00000505971 PTGS1P23219 599 aa23.98■■□□□ 1.43
TRIO-207ENST00000505971 ZNF543Q08ER8 600 aa23.98■■□□□ 1.43
TRIO-207ENST00000505971 TBC1D10CQ8IV04 446 aa23.98■■□□□ 1.43
TRIO-207ENST00000505971 FBXO16Q8IX29 292 aaPredicted RBP23.98■■□□□ 1.43
TRIO-207ENST00000505971 SEZ6LQ9BYH1 1024 aa23.98■■□□□ 1.43
TRIO-207ENST00000505971 ADD3Q9UEY8 706 aaKnown RBP23.98■■□□□ 1.43
TRIO-207ENST00000505971 RBM47A0AV96 593 aaKnown RBP23.97■■□□□ 1.43
TRIO-207ENST00000505971 NT5C2P49902 561 aa23.97■■□□□ 1.43
TRIO-207ENST00000505971 NUCB1Q02818 461 aa23.97■■□□□ 1.43
TRIO-207ENST00000505971 MYO9BQ13459 2157 aa23.97■■□□□ 1.43
TRIO-207ENST00000505971 TMEM240Q5SV17 173 aa23.97■■□□□ 1.43
TRIO-207ENST00000505971 FRMPD2Q68DX3 1309 aaPredicted RBP23.97■■□□□ 1.43
TRIO-207ENST00000505971 NOL8Q76FK4 1167 aaKnown RBP23.97■■□□□ 1.43
TRIO-207ENST00000505971 EEPD1Q7L9B9 569 aa23.97■■□□□ 1.43
TRIO-207ENST00000505971 CHD1LQ86WJ1 897 aa23.97■■□□□ 1.43
TRIO-207ENST00000505971 RILPL2Q969X0 211 aa23.97■■□□□ 1.43
TRIO-207ENST00000505971 AP5M1Q9H0R1 490 aa23.97■■□□□ 1.43
TRIO-207ENST00000505971 GPCPD1Q9NPB8 672 aa23.97■■□□□ 1.43
TRIO-207ENST00000505971 PNMA2Q9UL42 364 aa23.97■■□□□ 1.43
TRIO-207ENST00000505971 WDR19Q8NEZ3 1342 aa23.96■■□□□ 1.43
TRIO-207ENST00000505971 TLR3O15455 904 aaKnown RBP23.96■■□□□ 1.43
TRIO-207ENST00000505971 ALDH5A1P51649 535 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms