RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 AMPD2Q01433 879 aa8.72□□□□□ -1.01
MDM2-220ENST00000496959 NCAPHQ15003 741 aa8.72□□□□□ -1.01
MDM2-220ENST00000496959 TNNI3KQ59H18 835 aa8.72□□□□□ -1.01
MDM2-220ENST00000496959 EEF1DP3Q658K8 133 aa8.72□□□□□ -1.01
MDM2-220ENST00000496959 CILP2Q8IUL8 1156 aa8.72□□□□□ -1.01
MDM2-220ENST00000496959 LRRC56Q8IYG6 542 aaPredicted RBP8.72□□□□□ -1.01
MDM2-220ENST00000496959 APBA2Q99767 749 aa8.72□□□□□ -1.01
MDM2-220ENST00000496959 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.72□□□□□ -1.013e-24■□□□□ 9.6
MDM2-220ENST00000496959 CGGBP1Q9UFW8 167 aaPredicted RBP8.72□□□□□ -1.01
MDM2-220ENST00000496959 A0A1W2PQJ5 194 aa8.71□□□□□ -1.02
MDM2-220ENST00000496959 AURKAO14965 403 aa8.71□□□□□ -1.02
MDM2-220ENST00000496959 VAMP4O75379 141 aa8.71□□□□□ -1.02
MDM2-220ENST00000496959 ZNF143P52747 638 aaPredicted RBP8.71□□□□□ -1.02
MDM2-220ENST00000496959 GRB10Q13322 594 aa8.71□□□□□ -1.02
MDM2-220ENST00000496959 DPY19L1Q2PZI1 675 aa8.71□□□□□ -1.02
MDM2-220ENST00000496959 RCSD1Q6JBY9 416 aa8.71□□□□□ -1.02
MDM2-220ENST00000496959 SUSD2Q9UGT4 822 aa8.71□□□□□ -1.02
MDM2-220ENST00000496959 AKT3Q9Y243 479 aa8.71□□□□□ -1.02
MDM2-220ENST00000496959 SMAD7O15105 426 aaKnown RBP8.7□□□□□ -1.02
MDM2-220ENST00000496959 VIPR1P32241 457 aa8.7□□□□□ -1.02
MDM2-220ENST00000496959 SEPHS1P49903 392 aa8.7□□□□□ -1.02
MDM2-220ENST00000496959 YBX1P67809 324 aaKnown RBP8.7□□□□□ -1.02
MDM2-220ENST00000496959 MVKQ03426 396 aa8.7□□□□□ -1.02
MDM2-220ENST00000496959 RAB3GAP1Q15042 981 aa8.7□□□□□ -1.02
MDM2-220ENST00000496959 CIAPIN1Q6FI81 312 aa8.7□□□□□ -1.02
MDM2-220ENST00000496959 CRACR2BQ8N4Y2 399 aaPredicted RBP8.7□□□□□ -1.02
MDM2-220ENST00000496959 SGPP1Q9BX95 441 aa8.7□□□□□ -1.02
MDM2-220ENST00000496959 KRTAP9-9Q9BYP9 154 aa8.7□□□□□ -1.02
MDM2-220ENST00000496959 KRTAP9-4Q9BYQ2 154 aa8.7□□□□□ -1.02
MDM2-220ENST00000496959 TNFRSF12AQ9NP84 129 aa8.7□□□□□ -1.02
MDM2-220ENST00000496959 ACTR10Q9NZ32 417 aa8.7□□□□□ -1.02
MDM2-220ENST00000496959 STXBP3O00186 592 aa8.69□□□□□ -1.02
MDM2-220ENST00000496959 L1CAMP32004 1257 aa8.69□□□□□ -1.02
MDM2-220ENST00000496959 ARID5AQ03989 594 aa8.69□□□□□ -1.02
MDM2-220ENST00000496959 POMZP3Q6PJE2 187 aa8.69□□□□□ -1.02
MDM2-220ENST00000496959 MCMBPQ9BTE3 642 aa8.69□□□□□ -1.02
MDM2-220ENST00000496959 GCM1Q9NP62 436 aa8.69□□□□□ -1.02
MDM2-220ENST00000496959 KLHL14Q9P2G3 628 aa8.69□□□□□ -1.02
MDM2-220ENST00000496959 MBD1Q9UIS9 605 aaPredicted RBP8.69□□□□□ -1.02
MDM2-220ENST00000496959 BACE2Q9Y5Z0 518 aa8.69□□□□□ -1.02
MDM2-220ENST00000496959 NUDT19A8MXV4 375 aa8.68□□□□□ -1.02
MDM2-220ENST00000496959 NOP56O00567 594 aaKnown RBP8.68□□□□□ -1.02
MDM2-220ENST00000496959 CORO7P57737 925 aa8.68□□□□□ -1.02
MDM2-220ENST00000496959 LINC00310P59036 64 aa8.68□□□□□ -1.02
MDM2-220ENST00000496959 NR1I3Q14994 352 aa8.68□□□□□ -1.02
MDM2-220ENST00000496959 PDLIM7Q9NR12 457 aa8.68□□□□□ -1.02
MDM2-220ENST00000496959 PRKAG3Q9UGI9 489 aa8.68□□□□□ -1.02
MDM2-220ENST00000496959 CNOT6Q9ULM6 557 aaKnown RBP8.68□□□□□ -1.02
MDM2-220ENST00000496959 C2orf71A6NGG8 1288 aa8.67□□□□□ -1.02
MDM2-220ENST00000496959 NUAK1O60285 661 aa8.67□□□□□ -1.02
MDM2-220ENST00000496959 LARP1BQ659C4 914 aaKnown RBP8.67□□□□□ -1.02
MDM2-220ENST00000496959 C1QL4Q86Z23 238 aa8.67□□□□□ -1.02
MDM2-220ENST00000496959 BVESQ8NE79 360 aa8.67□□□□□ -1.02
MDM2-220ENST00000496959 NLGN2Q8NFZ4 835 aa8.67□□□□□ -1.02
MDM2-220ENST00000496959 PPP1R14AQ96A00 147 aa8.67□□□□□ -1.02
MDM2-220ENST00000496959 TINF2Q9BSI4 451 aa8.67□□□□□ -1.02
MDM2-220ENST00000496959 PODXL2Q9NZ53 605 aa8.67□□□□□ -1.02
MDM2-220ENST00000496959 APEX2Q9UBZ4 518 aa8.67□□□□□ -1.02
MDM2-220ENST00000496959 TRBV23OR9-2A0A075B6M9 112 aa8.66□□□□□ -1.02
MDM2-220ENST00000496959 E9PSI1 815 aa8.66□□□□□ -1.02
MDM2-220ENST00000496959 KCNH1O95259 989 aa8.66□□□□□ -1.02
MDM2-220ENST00000496959 MSL3P1P0C860 447 aa8.66□□□□□ -1.02
MDM2-220ENST00000496959 ZSCAN22P10073 491 aaPredicted RBP8.66□□□□□ -1.02
MDM2-220ENST00000496959 ETFBP38117 255 aa8.66□□□□□ -1.02
MDM2-220ENST00000496959 CBX2Q14781 532 aaPredicted RBP8.66□□□□□ -1.02
MDM2-220ENST00000496959 SIAH1Q8IUQ4 282 aa8.66□□□□□ -1.02
MDM2-220ENST00000496959 ZNF513Q8N8E2 541 aaPredicted RBP8.66□□□□□ -1.02
MDM2-220ENST00000496959 EMC9Q9Y3B6 208 aa8.66□□□□□ -1.02
MDM2-220ENST00000496959 FGRP09769 529 aa8.65□□□□□ -1.02
MDM2-220ENST00000496959 PAMP19021 973 aa8.65□□□□□ -1.02
MDM2-220ENST00000496959 DNAJA1P31689 397 aaKnown RBP8.65□□□□□ -1.02
MDM2-220ENST00000496959 ZNF385BQ569K4 471 aa8.65□□□□□ -1.02
MDM2-220ENST00000496959 BICRALQ6AI39 1079 aa8.65□□□□□ -1.02
MDM2-220ENST00000496959 C6orf15Q6UXA7 325 aaPredicted RBP8.65□□□□□ -1.02
MDM2-220ENST00000496959 TMC6Q7Z403 805 aa8.65□□□□□ -1.02
MDM2-220ENST00000496959 FAM178BQ8IXR5 827 aa8.65□□□□□ -1.02
MDM2-220ENST00000496959 CNTD2Q9H8S5 307 aa8.65□□□□□ -1.02
MDM2-220ENST00000496959 RFXAPO00287 272 aa8.64□□□□□ -1.03
MDM2-220ENST00000496959 N4BP3O15049 544 aa8.64□□□□□ -1.03
MDM2-220ENST00000496959 DDAH1O94760 285 aa8.64□□□□□ -1.03
MDM2-220ENST00000496959 CYBBP04839 570 aa8.64□□□□□ -1.03
MDM2-220ENST00000496959 RBM10P98175 930 aaKnown RBP8.64□□□□□ -1.03
MDM2-220ENST00000496959 FXNQ16595 210 aa8.64□□□□□ -1.03
MDM2-220ENST00000496959 ZC3H14Q6PJT7 736 aaKnown RBP8.64□□□□□ -1.03
MDM2-220ENST00000496959 PAQR3Q6TCH7 311 aa8.64□□□□□ -1.03
MDM2-220ENST00000496959 RPTNQ6XPR3 784 aa8.64□□□□□ -1.03
MDM2-220ENST00000496959 SLC43A3Q8NBI5 491 aa8.64□□□□□ -1.03
MDM2-220ENST00000496959 SIGLEC10Q96LC7 697 aa8.64□□□□□ -1.03
MDM2-220ENST00000496959 R3HCC1Q9Y3T6 440 aaKnown RBP8.64□□□□□ -1.03
MDM2-220ENST00000496959 IRAK3Q9Y616 596 aa8.64□□□□□ -1.03
MDM2-220ENST00000496959 NPHP3-ACAD11A0A0J9YXS1 232 aa8.63□□□□□ -1.03
MDM2-220ENST00000496959 SRGAP3O43295 1099 aa8.63□□□□□ -1.03
MDM2-220ENST00000496959 DBHP09172 617 aa8.63□□□□□ -1.03
MDM2-220ENST00000496959 MAPKAPK2P49137 400 aa8.63□□□□□ -1.03
MDM2-220ENST00000496959 SPOCD1Q6ZMY3 1216 aa8.63□□□□□ -1.03
MDM2-220ENST00000496959 TRIM59Q8IWR1 403 aa8.63□□□□□ -1.03
MDM2-220ENST00000496959 IRF2BPLQ9H1B7 796 aa8.63□□□□□ -1.03
MDM2-220ENST00000496959 ZNF408Q9H9D4 720 aa8.63□□□□□ -1.03
MDM2-220ENST00000496959 KCTD3Q9Y597 815 aa8.63□□□□□ -1.03
MDM2-220ENST00000496959 TACR1P25103 407 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms