RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 CCDC178Q5BJE1 867 aa15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 MUM1L1Q5H9M0 696 aa15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 CWC27Q6UX04 472 aaKnown RBP15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 DGKHQ86XP1 1220 aa15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 DEFB123Q8N688 67 aa15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 TRIM43Q96BQ3 446 aaPredicted RBP15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 DSCC1Q9BVC3 393 aa15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 MROH7Q68CQ1 1323 aa15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 DCDC2CA8MYV0 355 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 ADCY6O43306 1168 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 SLC16A2P36021 539 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 SNAP25P60880 206 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 ZNF543Q08ER8 600 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 GPATCH4Q5T3I0 446 aaKnown RBP15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 FAM109BQ6ICB4 259 aaPredicted RBP15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 TTBK2Q6IQ55 1244 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 SH3RF1Q7Z6J0 888 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 IQCA1Q86XH1 822 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 MORC4Q8TE76 937 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 BADQ92934 168 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 CTNNA3Q9UI47 895 aa15.36■□□□□ 0.05
ATPAF2-207ENST00000488753 MYADML2A6NDP7 307 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 PQBP1O60828 265 aaKnown RBP15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 ASGR1P07306 291 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 TNFAIP2Q03169 654 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 GNASQ5JWF2 1037 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 NSMFQ6X4W1 530 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 ANKS1AQ92625 1134 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 GPCPD1Q9NPB8 672 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 ADD3Q9UEY8 706 aaKnown RBP15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 GNEQ9Y223 722 aaKnown RBP15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 Q9Y3F1 56 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 ASTN1O14525 1302 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 NEDD4P46934 1319 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 FRMPD2Q68DX3 1309 aaPredicted RBP15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 WDR19Q8NEZ3 1342 aa15.35■□□□□ 0.05
ATPAF2-207ENST00000488753 LTBP2Q14767 1821 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 CTAGE5O15320 804 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 RAG1P15918 1043 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 CDK7P50613 346 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 FAAP100Q0VG06 881 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 SHHQ15465 462 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 IMMTQ16891 758 aaKnown RBP15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 IQSEC1Q6DN90 963 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 TLK2Q86UE8 772 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 SEZ6LQ9BYH1 1024 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 MAF1Q9H063 256 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 VTA1Q9NP79 307 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 TMEM39AQ9NV64 488 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 MTMR10Q9NXD2 777 aa15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 SUPT16HQ9Y5B9 1047 aaKnown RBP15.34■□□□□ 0.05
ATPAF2-207ENST00000488753 COL6A3P12111 3177 aa15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 A0A0U1RQG5 324 aaPredicted RBP15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 NFIBO00712 420 aa15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 CABYRO75952 493 aa15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 ITGB8P26012 769 aa15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 BAATQ14032 418 aaPredicted RBP15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 TAPT1Q6NXT6 567 aa15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 NOL8Q76FK4 1167 aaKnown RBP15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 CLEC4DQ8WXI8 215 aa15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 CNNM2Q9H8M5 875 aa15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 STXBP5LQ9Y2K9 1186 aa15.33■□□□□ 0.04
ATPAF2-207ENST00000488753 LAMA2P24043 3122 aaKnown RBP15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 ARVCFO00192 962 aa15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 ZEB2O60315 1214 aa15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 KDM4AO75164 1064 aa15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 IRX5P78411 483 aaPredicted RBP15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 C9orf50Q5SZB4 431 aa15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 Q7L0L9 218 aa15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 PNMA1Q8ND90 353 aa15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 ZSCAN10Q96SZ4 725 aaPredicted RBP15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 KRT23Q9C075 422 aa15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 AP5M1Q9H0R1 490 aa15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 TBX21Q9UL17 535 aa15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 RAD50Q92878 1312 aa15.32■□□□□ 0.04
ATPAF2-207ENST00000488753 B4E1Z4 1266 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 TIMP1P01033 207 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 SMPD1P17405 629 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 ALDH5A1P51649 535 aaPredicted RBP15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 SMAD3P84022 425 aaKnown RBP15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 FPGSQ05932 587 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 FSCN1Q16658 493 aaKnown RBP15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 TTC22Q5TAA0 569 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 RNF207Q6ZRF8 634 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 FBXO16Q8IX29 292 aaPredicted RBP15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 RGS22Q8NE09 1264 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 DNERQ8NFT8 737 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 VTI1AQ96AJ9 217 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 MPHOSPH6Q99547 160 aaKnown RBP15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 KAT14Q9H8E8 782 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 ZSWIM5Q9P217 1185 aa15.31■□□□□ 0.04
ATPAF2-207ENST00000488753 RBM47A0AV96 593 aaKnown RBP15.3■□□□□ 0.04
ATPAF2-207ENST00000488753 PTPDC1A2A3K4 754 aa15.3■□□□□ 0.04
ATPAF2-207ENST00000488753 TLR3O15455 904 aaKnown RBP15.3■□□□□ 0.04
ATPAF2-207ENST00000488753 DYNC1LI2O43237 492 aaPredicted RBP15.3■□□□□ 0.04
ATPAF2-207ENST00000488753 PDE4AP27815 886 aa15.3■□□□□ 0.04
ATPAF2-207ENST00000488753 DUSP28Q4G0W2 176 aa15.3■□□□□ 0.04
ATPAF2-207ENST00000488753 ASPRV1Q53RT3 343 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms