RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 TROQ12816 1431 aaPredicted RBP7.48□□□□□ -1.21
UPF3A-205ENST00000479712 MAP7Q14244 749 aa7.48□□□□□ -1.21
UPF3A-205ENST00000479712 UVSSAQ2YD98 709 aa7.48□□□□□ -1.21
UPF3A-205ENST00000479712 C16orf86Q6ZW13 317 aa7.48□□□□□ -1.21
UPF3A-205ENST00000479712 ZSWIM2Q8NEG5 633 aa7.48□□□□□ -1.21
UPF3A-205ENST00000479712 DNAJB8Q8NHS0 232 aa7.48□□□□□ -1.21
UPF3A-205ENST00000479712 APBA2Q99767 749 aa7.48□□□□□ -1.21
UPF3A-205ENST00000479712 SUSD2Q9UGT4 822 aa7.48□□□□□ -1.21
UPF3A-205ENST00000479712 USP19O94966 1318 aa7.48□□□□□ -1.21
UPF3A-205ENST00000479712 KRBA1A5PL33 1030 aa7.47□□□□□ -1.21
UPF3A-205ENST00000479712 CBFA2T2O43439 604 aa7.47□□□□□ -1.21
UPF3A-205ENST00000479712 FAM153BP0C7A2 387 aa7.47□□□□□ -1.21
UPF3A-205ENST00000479712 RNF4P78317 190 aa7.47□□□□□ -1.21
UPF3A-205ENST00000479712 NBPF12Q5TAG4 269 aaPredicted RBP7.47□□□□□ -1.21
UPF3A-205ENST00000479712 DCAF15Q66K64 600 aa7.47□□□□□ -1.21
UPF3A-205ENST00000479712 KIAA0907Q7Z7F0 614 aaPredicted RBP7.47□□□□□ -1.21
UPF3A-205ENST00000479712 ANKRD13AQ8IZ07 590 aa7.47□□□□□ -1.21
UPF3A-205ENST00000479712 EZH1Q92800 747 aaPredicted RBP7.47□□□□□ -1.21
UPF3A-205ENST00000479712 UTP4Q969X6 686 aaKnown RBP7.47□□□□□ -1.21
UPF3A-205ENST00000479712 SGSM3Q96HU1 749 aa7.47□□□□□ -1.21
UPF3A-205ENST00000479712 KREMEN1Q96MU8 473 aa7.47□□□□□ -1.21
UPF3A-205ENST00000479712 GBP3Q9H0R5 595 aa7.47□□□□□ -1.21
UPF3A-205ENST00000479712 CDC42BPAQ5VT25 1732 aa7.47□□□□□ -1.21
UPF3A-205ENST00000479712 TMEM131LA2VDJ0 1609 aa7.46□□□□□ -1.21
UPF3A-205ENST00000479712 ADCY3O60266 1144 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 SLITRK5O94991 958 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 BMP3P12645 472 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 ETV3P41162 512 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 ADGRE1Q14246 886 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 MBTPS1Q14703 1052 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 VPS72Q15906 364 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 LONRF2Q1L5Z9 754 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 TAF7LQ5H9L4 462 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 TMEM67Q5HYA8 995 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 ZBTB38Q8NAP3 1195 aaPredicted RBP7.46□□□□□ -1.22
UPF3A-205ENST00000479712 PPP1R14AQ96A00 147 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 MYRFLQ96LU7 910 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 FGD4Q96M96 766 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 FEZ1Q99689 392 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 KLHL25Q9H0H3 589 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 PRDM10Q9NQV6 1147 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 LRP2BPQ9P2M1 347 aa7.46□□□□□ -1.22
UPF3A-205ENST00000479712 CLIP1P30622 1438 aa7.45□□□□□ -1.22
UPF3A-205ENST00000479712 DYNC1LI2O43237 492 aaPredicted RBP7.45□□□□□ -1.22
UPF3A-205ENST00000479712 ASMTLO95671 621 aa7.45□□□□□ -1.22
UPF3A-205ENST00000479712 MAP4P27816 1152 aaKnown RBP7.45□□□□□ -1.22
UPF3A-205ENST00000479712 TCEA2Q15560 299 aa7.45□□□□□ -1.22
UPF3A-205ENST00000479712 TKFCQ3LXA3 575 aa7.45□□□□□ -1.22
UPF3A-205ENST00000479712 PLA2G4EQ3MJ16 856 aa7.45□□□□□ -1.22
UPF3A-205ENST00000479712 ADAT2Q7Z6V5 191 aaKnown RBP7.45□□□□□ -1.22
UPF3A-205ENST00000479712 CDH24Q86UP0 819 aa7.45□□□□□ -1.22
UPF3A-205ENST00000479712 RIN3Q8TB24 985 aa7.45□□□□□ -1.22
UPF3A-205ENST00000479712 PSMG3-AS1Q96PY0 264 aa7.45□□□□□ -1.22
UPF3A-205ENST00000479712 ASPNQ9BXN1 380 aa7.45□□□□□ -1.22
UPF3A-205ENST00000479712 DHX29Q7Z478 1369 aaKnown RBP7.45□□□□□ -1.22
UPF3A-205ENST00000479712 EFCAB6Q5THR3 1501 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 FAM95CA0A1B0GW59 222 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 A0A1W2PQU0 124 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 MSTNO14793 375 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 ITGB2P05107 769 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 GYS2P54840 703 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 CDK5R2Q13319 367 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 AUHQ13825 339 aaKnown RBP7.44□□□□□ -1.22
UPF3A-205ENST00000479712 PTPROQ16827 1216 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 ANKRD39Q53RE8 183 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 ZC3H12BQ5HYM0 836 aaKnown RBP7.44□□□□□ -1.22
UPF3A-205ENST00000479712 FILIP1Q7Z7B0 1213 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 TXNRD3Q86VQ6 643 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 DZIP1LQ8IYY4 767 aaKnown RBP7.44□□□□□ -1.22
UPF3A-205ENST00000479712 C7orf61Q8IZ16 206 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 ARMC10Q8N2F6 343 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 SYNPOQ8N3V7 929 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 TOP6BLQ8N6T0 577 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 LRRN4CLQ8ND94 238 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 RNF141Q8WVD5 230 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 VWCEQ96DN2 955 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 MEGF10Q96KG7 1140 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 KCNF1Q9H3M0 494 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 WHRNQ9P202 907 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 APEX2Q9UBZ4 518 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 SUGT1Q9Y2Z0 365 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 PRKAB1Q9Y478 270 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 ZNF451Q9Y4E5 1061 aa7.44□□□□□ -1.22
UPF3A-205ENST00000479712 GOLGB1Q14789 3259 aaKnown RBP7.44□□□□□ -1.22
UPF3A-205ENST00000479712 PPP1R12AO14974 1030 aaPredicted RBP7.43□□□□□ -1.22
UPF3A-205ENST00000479712 DNAJC6O75061 913 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 PPM1BO75688 479 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 YBX3P16989 372 aaKnown RBP eCLIP7.43□□□□□ -1.22
UPF3A-205ENST00000479712 CD247P20963 164 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 SEZ6L2Q6UXD5 910 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
UPF3A-205ENST00000479712 FAM20CQ8IXL6 584 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 ABHD8Q96I13 439 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 GPATCH3Q96I76 525 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 SPC25Q9HBM1 224 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 ARHGEF4Q9NR80 690 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 TPX2Q9ULW0 747 aaKnown RBP7.43□□□□□ -1.22
UPF3A-205ENST00000479712 PCDHB12Q9Y5F1 795 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 ADCY9O60503 1353 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms