RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 TMCO3Q6UWJ1 677 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 NEK8Q86SG6 692 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 KIAA0825Q8IV33 1275 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 KRT222Q8N1A0 295 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 FNBP4Q8N3X1 1017 aaPredicted RBP20.02■□□□□ 0.8
MCF2L-221ENST00000469415 NEDD1Q8NHV4 660 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 NUDT12Q9BQG2 462 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 RHOXF2Q9BQY4 288 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 ZC3H12CQ9C0D7 883 aaKnown RBP20.02■□□□□ 0.8
MCF2L-221ENST00000469415 ZNF287Q9HBT7 754 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 ABHD10Q9NUJ1 306 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 EXOC1Q9NV70 894 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 RMND1Q9NWS8 449 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 MTIF2P46199 727 aaKnown RBP20.02■□□□□ 0.8
MCF2L-221ENST00000469415 NFIAQ12857 509 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 C16orf86Q6ZW13 317 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 AGPAT5Q9NUQ2 364 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 PSMA7O14818 248 aa20.02■□□□□ 0.79
MCF2L-221ENST00000469415 SLC37A4O43826 429 aa20.02■□□□□ 0.79
MCF2L-221ENST00000469415 CNGA4Q8IV77 575 aa20.02■□□□□ 0.79
MCF2L-221ENST00000469415 ZFPM1Q8IX07 1006 aa20.02■□□□□ 0.79
MCF2L-221ENST00000469415 ADSSL1Q8N142 457 aa20.02■□□□□ 0.79
MCF2L-221ENST00000469415 CERS5Q8N5B7 392 aa20.02■□□□□ 0.79
MCF2L-221ENST00000469415 ZNF622Q969S3 477 aaKnown RBP eCLIP20.02■□□□□ 0.79
MCF2L-221ENST00000469415 M0R2N6 131 aa20.01■□□□□ 0.79
MCF2L-221ENST00000469415 TRIM21P19474 475 aaKnown RBP20.01■□□□□ 0.79
MCF2L-221ENST00000469415 PBX1P40424 430 aa20.01■□□□□ 0.79
MCF2L-221ENST00000469415 KIFC2Q96AC6 838 aa20.01■□□□□ 0.79
MCF2L-221ENST00000469415 CDK5RAP3Q96JB5 506 aa20.01■□□□□ 0.79
MCF2L-221ENST00000469415 PANX2Q96RD6 677 aa20.01■□□□□ 0.79
MCF2L-221ENST00000469415 KANSL2Q9H9L4 492 aa20.01■□□□□ 0.79
MCF2L-221ENST00000469415 ZCCHC17Q9NP64 241 aaKnown RBP20.01■□□□□ 0.79
MCF2L-221ENST00000469415 ANKRD40Q6AI12 368 aa20.01■□□□□ 0.79
MCF2L-221ENST00000469415 GLIS3Q8NEA6 775 aa20.01■□□□□ 0.79
MCF2L-221ENST00000469415 ZHX3Q9H4I2 956 aa20.01■□□□□ 0.79
MCF2L-221ENST00000469415 TULP1O00294 542 aaPredicted RBP20■□□□□ 0.79
MCF2L-221ENST00000469415 STIM1Q13586 685 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 NRAPQ86VF7 1730 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 FAM170AA1A519 330 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 KLRC4O43908 158 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 PDHBP11177 359 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 GNA11P29992 359 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 MAP3K9P80192 1104 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 CYP27A1Q02318 531 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 FCHSD1Q86WN1 690 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 PLCD3Q8N3E9 789 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 ZMYND12Q9H0C1 365 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 LRWD1Q9UFC0 647 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 PDS5AQ29RF7 1337 aaKnown RBP20■□□□□ 0.79
MCF2L-221ENST00000469415 TBC1D8BQ0IIM8 1120 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 SH3GLB2Q9NR46 395 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 HDAC6Q9UBN7 1215 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 MRFAP1Q9Y605 127 aa20■□□□□ 0.79
MCF2L-221ENST00000469415 A0A1B0GUL6 1792 aa19.99■□□□□ 0.79
MCF2L-221ENST00000469415 LIMA1Q9UHB6 759 aaKnown RBP19.99■□□□□ 0.79
MCF2L-221ENST00000469415 LUC7L2Q9Y383 392 aaKnown RBP19.99■□□□□ 0.79
MCF2L-221ENST00000469415 H2AFXP16104 143 aaPredicted RBP19.99■□□□□ 0.79
MCF2L-221ENST00000469415 ENOX2Q16206 610 aaKnown RBP19.99■□□□□ 0.79
MCF2L-221ENST00000469415 CALCRLQ16602 461 aa19.99■□□□□ 0.79
MCF2L-221ENST00000469415 KRT25Q7Z3Z0 450 aa19.99■□□□□ 0.79
MCF2L-221ENST00000469415 CAPZA3Q96KX2 299 aa19.99■□□□□ 0.79
MCF2L-221ENST00000469415 TUBGCP2Q9BSJ2 902 aa19.99■□□□□ 0.79
MCF2L-221ENST00000469415 PARD6BQ9BYG5 372 aa19.99■□□□□ 0.79
MCF2L-221ENST00000469415 TRIM9Q9C026 710 aa19.99■□□□□ 0.79
MCF2L-221ENST00000469415 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L15C9J2P7 530 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L10C9JJH3 530 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L13C9JLJ4 530 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L11C9JVI0 530 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L18D6R9N7 530 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L22D6RA61 530 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L17D6RBQ6 530 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L19D6RCP7 530 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L20D6RJB6 530 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 PPEF1O14829 653 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L24Q0WX57 530 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 NCAPH2Q6IBW4 605 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 USP17L6PQ6QN14 398 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 DRC1Q96MC2 740 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 SRGAP2O75044 1071 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 PNMA6AP0CW24 399 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-221ENST00000469415 IKQ13123 557 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-221ENST00000469415 TSR1Q2NL82 804 aaKnown RBP19.98■□□□□ 0.79
MCF2L-221ENST00000469415 MB21D1Q8N884 522 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 FAM207AQ9NSI2 230 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-221ENST00000469415 ARGLU1Q9NWB6 273 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-221ENST00000469415 MTMR4Q9NYA4 1195 aa19.98■□□□□ 0.79
MCF2L-221ENST00000469415 MORC2Q9Y6X9 1032 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-221ENST00000469415 TNRC6CQ9HCJ0 1690 aaKnown RBP19.98■□□□□ 0.79
MCF2L-221ENST00000469415 GOLGA6L9A6NEM1 432 aa19.97■□□□□ 0.79
MCF2L-221ENST00000469415 GYS2P54840 703 aa19.97■□□□□ 0.79
MCF2L-221ENST00000469415 CALML4Q96GE6 196 aa19.97■□□□□ 0.79
MCF2L-221ENST00000469415 SCN7AQ01118 1682 aa19.97■□□□□ 0.79
MCF2L-221ENST00000469415 EFCAB8A8MWE9 144 aa19.97■□□□□ 0.79
MCF2L-221ENST00000469415 H7C1D1 291 aa19.97■□□□□ 0.79
MCF2L-221ENST00000469415 SPAG1Q07617 926 aa19.97■□□□□ 0.79
MCF2L-221ENST00000469415 DMTNQ08495 405 aa19.97■□□□□ 0.79
MCF2L-221ENST00000469415 CCDC155Q8N6L0 562 aa19.97■□□□□ 0.79
MCF2L-221ENST00000469415 SNX29Q8TEQ0 813 aa19.97■□□□□ 0.79
MCF2L-221ENST00000469415 CNOT6LQ96LI5 555 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms