RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 C2orf69Q8N8R5 385 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 ITFG2Q969R8 447 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 WDR24Q96S15 920 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 DCP1AQ9NPI6 582 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 NAV1Q8NEY1 1877 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 TMEM88BA6NKF7 163 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 PRKAB2O43741 272 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 ADD1P35611 737 aaKnown RBP12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 APLP1P51693 650 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 FMR1Q06787 632 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 GRIK3Q13003 919 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 TBX2Q13207 712 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 FAM173BQ6P4H8 233 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 FMR1NBQ8N0W7 255 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 TRIM6Q9C030 488 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 MCM9Q9NXL9 1143 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 SAP30BPQ9UHR5 308 aaKnown RBP12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 N4BP1O75113 896 aaKnown RBP12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 CCDC129Q6ZRS4 1044 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 MRPS27Q92552 414 aaKnown RBP12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 PI4KBQ9UBF8 816 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 PAPPA2Q9BXP8 1791 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 DDTLA6NHG4 134 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 TTC36A6NLP5 189 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 POLR3DP05423 398 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 TOP1P11387 765 aaKnown RBP12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 NEFHP12036 1026 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 SLC8A3P57103 927 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 CST9Q5W186 159 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 ISM2Q6H9L7 571 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 ARMC9Q7Z3E5 817 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 CDAN1Q8IWY9 1227 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 NECAB1Q8N987 351 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 ZKSCAN4Q969J2 545 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 BAG1Q99933 345 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 JPH2Q9BR39 696 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 NAA15Q9BXJ9 866 aaKnown RBP12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 MYO1AQ9UBC5 1043 aa12.87□□□□□ -0.35
TRAPPC3-205ENST00000462715 SSC5DA1L4H1 1573 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 MYH1P12882 1939 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 SRRM3A6NNA2 597 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 GSG1L2A8MUP6 293 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 ZEB2O60315 1214 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 SYF2O95926 243 aaKnown RBP12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 SCP2P22307 547 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 SMTNP53814 917 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 ADCY2Q08462 1091 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 ADALQ6DHV7 355 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 CCDC12Q8WUD4 166 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 SH3GL3Q99963 347 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 GOLPH3LQ9H4A5 285 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 BATF3Q9NR55 127 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 ARPP21Q9UBL0 812 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 DDX60LQ5H9U9 1706 aaKnown RBP12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 IREB2P48200 963 aaKnown RBP12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 IRAK1P51617 712 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 UBASH3AP57075 661 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 ADCK5Q3MIX3 580 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 ZNF589Q86UQ0 364 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 CRACR2BQ8N4Y2 399 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 FAM76AQ8TAV0 307 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 RUBCNQ92622 972 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 PNKPQ96T60 521 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 ZNF341Q9BYN7 854 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 HERC5Q9UII4 1024 aaKnown RBP12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 ODF2LQ9ULJ1 636 aa12.86□□□□□ -0.35
TRAPPC3-205ENST00000462715 TARSL2A2RTX5 802 aaKnown RBP12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 H3BQV1 296 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 RTN2O75298 545 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 KIAA0754O94854 1291 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 KRT32Q14532 448 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 FBXW10Q5XX13 1052 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 CREB3L3Q68CJ9 461 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 BRAPQ7Z569 592 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 TAX1BP1Q86VP1 789 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 FOXP4Q8IVH2 680 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 IFNL3Q8IZI9 196 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 FSIP1Q8NA03 581 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 MAP4K1Q92918 833 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 NAPBQ9H115 298 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
TRAPPC3-205ENST00000462715 EIF3HO15372 352 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 TBC1D12O60347 775 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 BIRC2Q13490 618 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 PRKG1Q13976 671 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 CPLX2Q6PUV4 134 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 ARMC2Q8NEN0 867 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 SMARCC2Q8TAQ2 1214 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 N4BP2L2Q92802 583 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 SDF4Q9BRK5 362 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 EHD4Q9H223 541 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms