RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	ABRA	Q8N0Z2	381 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	HS3ST6	Q96QI5	342 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	KIF2C	Q99661	725 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	NUDT12	Q9BQG2	462 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	RANBP17	Q9H2T7	1088 aa	Known RBP	11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	LY9	Q9HBG7	655 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	RAVER2	Q9HCJ3	691 aa	Known RBP	11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	GPCPD1	Q9NPB8	672 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	PARP14	Q460N5	1801 aa		11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	GOLGA8H	P0CJ92	632 aa		11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	ELN	P15502	786 aa		11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	EXOSC10	Q01780	885 aa	Known RBP	11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	SART3	Q15020	963 aa	Known RBP	11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	TMEM67	Q5HYA8	995 aa		11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	SYDE2	Q5VT97	1194 aa		11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	SNRNP48	Q6IEG0	339 aa	Known RBP	11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	NCAPG2	Q86XI2	1143 aa		11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	TMEM87B	Q96K49	555 aa		11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	NEK1	Q96PY6	1258 aa		11.61	□□□□□ -0.55
CHEK2-221	ENST00000456369	MKI67	P46013	3256 aa	Known RBP	11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	PALM3	A6NDB9	673 aa	Predicted RBP	11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	CCDC85C	A6NKD9	419 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	SH2B2	O14492	632 aa	Predicted RBP	11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	COBL	O75128	1261 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	ZKSCAN1	P17029	563 aa	Predicted RBP	11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	CYP2B6	P20813	491 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	ADORA2A	P29274	412 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	COPB2	P35606	906 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	RGS2	P41220	211 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	SNAP25	P60880	206 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	IK	Q13123	557 aa	Predicted RBP	11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	KRT32	Q14532	448 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	WTAP	Q15007	396 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	CCL14	Q16627	93 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	ASPRV1	Q53RT3	343 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	WDR78	Q5VTH9	848 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	DHX32	Q7L7V1	743 aa	Known RBP	11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	NBPF11	Q86T75	865 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	CPXCR1	Q8N123	301 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	TRIB2	Q92519	343 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	AGBL1	Q96MI9	1066 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	APBA2	Q99767	749 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	CPVL	Q9H3G5	476 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	MAD2L2	Q9UI95	211 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	ISY1	Q9ULR0	285 aa	Known RBP	11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	SNX14	Q9Y5W7	946 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	MYH4	Q9Y623	1939 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	WDR19	Q8NEZ3	1342 aa		11.6	□□□□□ -0.55
CHEK2-221	ENST00000456369	DNAJC25-GNG10	A0A024R161	153 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	ERICH2	A1L162	156 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	ICAM1	P05362	532 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	PARP1	P09874	1014 aa	Known RBP	11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	FCER1A	P12319	257 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	LIFR	P42702	1097 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	GRM4	Q14833	912 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	SLC35G1	Q2M3R5	365 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	MAP3K21	Q5TCX8	1036 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	TMTC2	Q8N394	836 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	STAG2	Q8N3U4	1231 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	ZNF454	Q8N9F8	522 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	NPLOC4	Q8TAT6	608 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	DDX12P	Q92771	950 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	MAP3K14	Q99558	947 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	UBA5	Q9GZZ9	404 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	FLRT1	Q9NZU1	646 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	IVNS1ABP	Q9Y6Y0	642 aa		11.59	□□□□□ -0.55
CHEK2-221	ENST00000456369	PLXNB2	O15031	1838 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	POTEB3	A0JP26	581 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	KLRF2	D3W0D1	207 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369		K7ELQ4	463 aa	Predicted RBP	11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	HMGCR	P04035	888 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	INHA	P05111	366 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	HMGB1	P09429	215 aa	Known RBP	11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	SLC4A3	P48751	1232 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	TRIM32	Q13049	653 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	MTFR1	Q15390	333 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	CCDC174	Q6PII3	467 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	POTEB	Q6S5H4	581 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	SGMS1	Q86VZ5	419 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	TRMT44	Q8IYL2	757 aa	Known RBP	11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	ADGRF4	Q8IZF3	695 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	CHST13	Q8NET6	341 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	MTMR8	Q96EF0	704 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	MMP19	Q99542	508 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	LRRC2	Q9BYS8	371 aa		11.58	□□□□□ -0.56
CHEK2-221	ENST00000456369	MGAM	O43451	1857 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	CYTH3	O43739	400 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	DDAH1	O94760	285 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	PGK2	P07205	417 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	CPA1	P15085	419 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	TAL1	P17542	331 aa	Predicted RBP	11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	MCM2	P49736	904 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	KCTD2	Q14681	263 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	ZNF792	Q3KQV3	632 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	TKFC	Q3LXA3	575 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	MUM1L1	Q5H9M0	696 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	OLFML2B	Q68BL8	750 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	CATIP	Q7Z7H3	387 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	DPP9	Q86TI2	863 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms