RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ACRP10323 421 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 COL9A1P20849 921 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 CYP2C18P33260 490 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 CXCL17Q6UXB2 119 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 NOL8Q76FK4 1167 aaKnown RBP16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 STAG1Q8WVM7 1258 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 OSBP2Q969R2 916 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 NOC4LQ9BVI4 516 aaKnown RBP16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 EPB41L4AQ9HCS5 686 aaPredicted RBP16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 VTA1Q9NP79 307 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 RNF146Q9NTX7 359 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 CXXC1Q9P0U4 656 aaPredicted RBP16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 PCDHA11Q9Y5I1 949 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 PATL2C9JE40 543 aaKnown RBP16.98■□□□□ 0.31
LYSMD3-202ENST00000453259 TMEM232C9JQI7 657 aa16.98■□□□□ 0.31
LYSMD3-202ENST00000453259 SLC1A4P43007 532 aa16.98■□□□□ 0.31
LYSMD3-202ENST00000453259 CNTN2Q02246 1040 aa16.98■□□□□ 0.31
LYSMD3-202ENST00000453259 LRRC47Q8N1G4 583 aaKnown RBP16.98■□□□□ 0.31
LYSMD3-202ENST00000453259 BCL11AQ9H165 835 aa16.98■□□□□ 0.31
LYSMD3-202ENST00000453259 HOMER2Q9NSB8 354 aa16.98■□□□□ 0.31
LYSMD3-202ENST00000453259 SLC4A7Q9Y6M7 1214 aa16.98■□□□□ 0.31
LYSMD3-202ENST00000453259 LRRC37A2A6NM11 1700 aa16.98■□□□□ 0.31
LYSMD3-202ENST00000453259 ASTN1O14525 1302 aa16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 ZNF536O15090 1300 aa16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 APPP05067 770 aa16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 IRX5P78411 483 aaPredicted RBP16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 BEX3Q00994 111 aa16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 ADGRE1Q14246 886 aa16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 MORC4Q8TE76 937 aa16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 TRERF1Q96PN7 1200 aa16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 UHRF1Q96T88 793 aaPredicted RBP16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 ADD3Q9UEY8 706 aaKnown RBP16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 PNMA2Q9UL42 364 aa16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 NCOR1O75376 2440 aa16.97■□□□□ 0.31
LYSMD3-202ENST00000453259 SOWAHBA6NEL2 793 aa16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 PRDM1O75626 825 aa16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 POU3F3P20264 500 aaPredicted RBP16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 IGFBP4P22692 258 aa16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 IKQ13123 557 aaPredicted RBP16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 PPP2R2DQ66LE6 453 aa16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 IFNL3Q8IZI9 196 aa16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 PPM1EQ8WY54 764 aa16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 NKX2-4Q9H2Z4 354 aa16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 POLR3EQ9NVU0 708 aa16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 CYP39A1Q9NYL5 469 aa16.96■□□□□ 0.31
LYSMD3-202ENST00000453259 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 B4GALT4O60513 344 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 SMPD1P17405 629 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 KCNA4P22459 653 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 RFC2P35250 354 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 CPT1AP50416 773 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 RCSD1Q6JBY9 416 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 OTOP2Q7RTS6 562 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 C1QTNF1Q9BXJ1 281 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 NAPBQ9H115 298 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 GRIN2DO15399 1336 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 TTC41PQ6P2S7 1318 aa16.95■□□□□ 0.3
LYSMD3-202ENST00000453259 DYNC1LI2O43237 492 aaPredicted RBP16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 ACTN1P12814 892 aa16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 ALAS1P13196 640 aa16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 ATP2A2P16615 1042 aaKnown RBP16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 TFAP4Q01664 338 aa16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 DUSP28Q4G0W2 176 aa16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 BRDTQ58F21 947 aaPredicted RBP16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 TAPT1Q6NXT6 567 aa16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 STK11IPQ8N1F8 1099 aa16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 AGBL1Q96MI9 1066 aa16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 MPHOSPH6Q99547 160 aaKnown RBP16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 WNT8AQ9H1J5 351 aa16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 ALDH8A1Q9H2A2 487 aaPredicted RBP16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 ISY1Q9ULR0 285 aaKnown RBP16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 RAD50Q92878 1312 aa16.94■□□□□ 0.3
LYSMD3-202ENST00000453259 CHD7Q9P2D1 2997 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 BDP1A6H8Y1 2624 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 ERC2O15083 957 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 KPNA6O60684 536 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 ICAM1P05362 532 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 CCL23P55773 120 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 PPARAQ07869 468 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 PHOSPHO2Q8TCD6 241 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 SLC9A7Q96T83 725 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 TRPV6Q9H1D0 765 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 ARIH1Q9Y4X5 557 aaPredicted RBP16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 UMODL1Q5DID0 1318 aa16.93■□□□□ 0.3
LYSMD3-202ENST00000453259 M0R2C6 588 aa16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 NKRFO15226 690 aaKnown RBP eCLIP16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 GTPBP6O43824 516 aaPredicted RBP16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 MCCP23508 829 aa16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 CCDC85BQ15834 202 aaPredicted RBP16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 DCAF4Q8WV16 495 aa16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 DCTPP1Q9H773 170 aa16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 CCPG1Q9ULG6 757 aa16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 PRR12Q9ULL5 1215 aa16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 STX8Q9UNK0 236 aa16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 COG5Q9UP83 839 aa16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 GBF1Q92538 1859 aa16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 MYO9BQ13459 2157 aa16.92■□□□□ 0.3
LYSMD3-202ENST00000453259 TSPY2A6NKD2 308 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms