RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 LAMA2P24043 3122 aaKnown RBP13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 MYH6P13533 1939 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 PRPF3O43395 683 aaKnown RBP13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 PDHBP11177 359 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 COL6A1P12109 1028 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 GPATCH4Q5T3I0 446 aaKnown RBP13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 FAM177A1Q8N128 213 aaPredicted RBP13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 GMCL1P1Q8NEA9 526 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 DCAF4Q8WV16 495 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 MYLIPQ8WY64 445 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 TNPO1Q92973 898 aaKnown RBP13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 LBHD1Q9BQE6 289 aaPredicted RBP13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 SPZ1Q9BXG8 430 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 SLC26A6Q9BXS9 759 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 ARHGEF10LQ9HCE6 1279 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 MAD2L2Q9UI95 211 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 ATP6V1DQ9Y5K8 247 aa13.55□□□□□ -0.24
AC009404.1-202ENST00000439955 H3BQV1 296 aa13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 PLEKHA8P1O95397 391 aa13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 F13A1P00488 732 aa13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 CCND3P30281 292 aaPredicted RBP13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 JAG1P78504 1218 aa13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 AKAP17AQ02040 695 aaKnown RBP13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 SPP2Q13103 211 aa13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 MAP3K21Q5TCX8 1036 aa13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 CLEC10AQ8IUN9 316 aa13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 SIAH1Q8IUQ4 282 aa13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 LRRC47Q8N1G4 583 aaKnown RBP13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 PHKBQ93100 1093 aa13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 GBP4Q96PP9 640 aa13.54□□□□□ -0.24
AC009404.1-202ENST00000439955 VPS37CA5D8V6 355 aaPredicted RBP13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 GCLCP48506 637 aaPredicted RBP13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 HMGCS2P54868 508 aa13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 SRBD1Q8N5C6 995 aaKnown RBP13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 FBXO18Q8NFZ0 1043 aa13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 GMCL1Q96IK5 515 aa13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 C8orf76Q96K31 380 aa13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 ALG1Q9BT22 464 aa13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 ASCC2Q9H1I8 757 aaPredicted RBP13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 SEMA6BQ9H3T3 888 aa13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 TMX2Q9Y320 296 aa13.53□□□□□ -0.24
AC009404.1-202ENST00000439955 USP17L5A8MUK1 530 aa13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 KLRF2D3W0D1 207 aa13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 XBP1P17861 261 aa13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 ATN1P54259 1190 aaPredicted RBP13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 ATP2B2Q01814 1243 aa13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 TRIM29Q14134 588 aa13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 CCL14Q16627 93 aa13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 SHROOM1Q2M3G4 852 aaPredicted RBP13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 LHX8Q68G74 356 aa13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 STAG2Q8N3U4 1231 aa13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 SENP6Q9GZR1 1112 aaPredicted RBP13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 ZSCAN16Q9H4T2 348 aaPredicted RBP13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 GOPCQ9HD26 462 aa13.52□□□□□ -0.25
AC009404.1-202ENST00000439955 PRUNE2Q8WUY3 3088 aa13.51□□□□□ -0.25
AC009404.1-202ENST00000439955 SHHQ15465 462 aa13.51□□□□□ -0.25
AC009404.1-202ENST00000439955 PKN1Q16512 942 aa13.51□□□□□ -0.25
AC009404.1-202ENST00000439955 PFKFB3Q16875 520 aaPredicted RBP13.51□□□□□ -0.25
AC009404.1-202ENST00000439955 C9orf50Q5SZB4 431 aa13.51□□□□□ -0.25
AC009404.1-202ENST00000439955 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
AC009404.1-202ENST00000439955 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
AC009404.1-202ENST00000439955 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
AC009404.1-202ENST00000439955 RIOX1Q9H6W3 641 aa13.51□□□□□ -0.25
AC009404.1-202ENST00000439955 A0A1W2PRG0 241 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 F5H6K3 240 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 hCG_1984214I3L0E3 225 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 DTNBO60941 627 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 NDUFB10O96000 172 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 SCG2P13521 617 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 FOSL2P15408 326 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 SLC1A4P43007 532 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 KLRC3Q07444 240 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 KRT40Q6A162 431 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 CMTR1Q8N1G2 835 aaKnown RBP13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 CCDC82Q8N4S0 544 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 ZNF713Q8N859 430 aaPredicted RBP13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 ZNF280CQ8ND82 737 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 NUDT12Q9BQG2 462 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 WDR18Q9BV38 432 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 KIAA1683Q9H0B3 1180 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 TTYH1Q9H313 450 aaPredicted RBP13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 VCPKMTQ9H867 229 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 AS3MTQ9HBK9 375 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 TXNRD2Q9NNW7 524 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 SH3GLB2Q9NR46 395 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 V9GY48 417 aaPredicted RBP13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 MYH15Q9Y2K3 1946 aa13.5□□□□□ -0.25
AC009404.1-202ENST00000439955 PHIPQ8WWQ0 1821 aa13.49□□□□□ -0.25
AC009404.1-202ENST00000439955 CYTH3O43739 400 aa13.49□□□□□ -0.25
AC009404.1-202ENST00000439955 PPFIA3O75145 1194 aa13.49□□□□□ -0.25
AC009404.1-202ENST00000439955 BAG4O95429 457 aaKnown RBP13.49□□□□□ -0.25
AC009404.1-202ENST00000439955 PTMSP20962 102 aa13.49□□□□□ -0.25
AC009404.1-202ENST00000439955 RESTQ13127 1097 aa13.49□□□□□ -0.25
AC009404.1-202ENST00000439955 PABPC4Q13310 644 aaKnown RBP eCLIP13.49□□□□□ -0.25
AC009404.1-202ENST00000439955 CCDC96Q2M329 555 aa13.49□□□□□ -0.25
AC009404.1-202ENST00000439955 BTNL9Q6UXG8 535 aa13.49□□□□□ -0.25
AC009404.1-202ENST00000439955 BRAPQ7Z569 592 aa13.49□□□□□ -0.25
AC009404.1-202ENST00000439955 LPAR1Q92633 364 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms