RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 GIMAP2Q9UG22 337 aa7.45□□□□□ -1.22
CLIP4-205ENST00000415891 PAIP2BQ9ULR5 123 aaKnown RBP7.45□□□□□ -1.22
CLIP4-205ENST00000415891 ATP11BQ9Y2G3 1177 aa7.45□□□□□ -1.22
CLIP4-205ENST00000415891 SYNJ2BP-COX16A0A087WUM0 186 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 TARSL2A2RTX5 802 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 HNRNPCL2B2RXH8 293 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 HNRNPCL1O60812 293 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 PLCG2P16885 1265 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 ASMTP46597 345 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 TRIM71Q2Q1W2 868 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 SETMARQ53H47 684 aaPredicted RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 FCRLBQ6BAA4 426 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 FAM180BQ6P0A1 224 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 SH3BP5LQ7L8J4 393 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 ATG9AQ7Z3C6 839 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 LSMEM2Q8N112 164 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 TAB3Q8N5C8 712 aaPredicted RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 STK32AQ8WU08 396 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 NTPCRQ9BSD7 190 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 TEX13BQ9BXU2 312 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 SMARCAD1Q9H4L7 1026 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 ZSCAN16Q9H4T2 348 aaPredicted RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 NCOA5Q9HCD5 579 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 ATPIF1Q9UII2 106 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 EDARQ9UNE0 448 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 C17orf113A0A1B0GUU1 675 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 PITPNM1O00562 1244 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 ZBTB14O43829 449 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 ZEB2O60315 1214 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 RNGTTO60942 597 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 CDC45O75419 566 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 UBL4AP11441 157 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 PSMA4P25789 261 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 VARSP26640 1264 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 KRT20P35900 424 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 GCLCP48506 637 aaPredicted RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 MAN2A2P49641 1150 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 PLTPP55058 493 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 NFIAQ12857 509 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 SERINC3Q13530 473 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 MAP7Q14244 749 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 SSPNQ14714 243 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 C15orf59Q2T9L4 293 aaPredicted RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 DALRD3Q5D0E6 543 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 INTS3Q68E01 1043 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 CWF19L1Q69YN2 538 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 ZNF600Q6ZNG1 722 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 FAM196AQ6ZSG2 479 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 RALYLQ86SE5 291 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 CCDC83Q8IWF9 413 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 C7orf61Q8IZ16 206 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 RNF10Q8N5U6 811 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 ZNF540Q8NDQ6 660 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 IPMKQ8NFU5 416 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 FAM161BQ96MY7 647 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 SAMD11Q96NU1 681 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 UPF3BQ9BZI7 483 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 TRPV6Q9H1D0 765 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 SEPT11Q9NVA2 429 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 DDX18Q9NVP1 670 aaKnown RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 POLR3EQ9NVU0 708 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 AFG3L2Q9Y4W6 797 aa7.44□□□□□ -1.22
CLIP4-205ENST00000415891 MAFBQ9Y5Q3 323 aaPredicted RBP7.44□□□□□ -1.22
CLIP4-205ENST00000415891 NDC80O14777 642 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 CYP27B1O15528 508 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 ZBTB43O43298 467 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 PLOD3O60568 738 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 BCRP11274 1271 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 PRKAR2AP13861 404 aaKnown RBP7.43□□□□□ -1.22
CLIP4-205ENST00000415891 TUFMP49411 452 aaKnown RBP7.43□□□□□ -1.22
CLIP4-205ENST00000415891 OXCT1P55809 520 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 CORO7P57737 925 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 RUNX1T1Q06455 604 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 OASLQ15646 514 aaKnown RBP7.43□□□□□ -1.22
CLIP4-205ENST00000415891 GPR162Q16538 588 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 TEX35Q5T0J7 233 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 RCSD1Q6JBY9 416 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 KDELC1Q6UW63 502 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 EEPD1Q7L9B9 569 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 TMC4Q7Z404 712 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 LSMEM1Q8N8F7 131 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 OR8K1Q8NGG5 319 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 ATP6V0A1Q93050 837 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 KIF1BPQ96EK5 621 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 DESI2Q9BSY9 194 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 CARD11Q9BXL7 1154 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 B3GNT4Q9C0J1 378 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 SERHL2Q9H4I8 314 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 CLK4Q9HAZ1 481 aaKnown RBP7.43□□□□□ -1.22
CLIP4-205ENST00000415891 ALG13Q9NP73 1137 aaKnown RBP7.43□□□□□ -1.22
CLIP4-205ENST00000415891 BLOC1S4Q9NUP1 217 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 ZIM2Q9NZV7 527 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 GRID1Q9ULK0 1009 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 MYO6Q9UM54 1294 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 ADAMTS8Q9UP79 889 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 ERCC6Q03468 1493 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 TTLL13PA6NNM8 815 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 TIPRLO75663 272 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 GFPT2O94808 682 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 MAP3K6O95382 1288 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms