RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 DPP9Q86TI2 863 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 MICU3Q86XE3 530 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
VAMP2-202ENST00000404970 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 PIGSQ96S52 555 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 MAP3K14Q99558 947 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 AGXT2Q9BYV1 514 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 OPLAHO14841 1288 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 HMGB1P09429 215 aaKnown RBP16.35■□□□□ 0.21
VAMP2-202ENST00000404970 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
VAMP2-202ENST00000404970 TOB2Q14106 344 aaPredicted RBP16.35■□□□□ 0.21
VAMP2-202ENST00000404970 TKFCQ3LXA3 575 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 OLFML2BQ68BL8 750 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 SLC30A10Q6XR72 485 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 TMTC2Q8N394 836 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 BRF1Q92994 677 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 IL17RAQ96F46 866 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 FAM217BQ9NTX9 383 aaPredicted RBP16.35■□□□□ 0.21
VAMP2-202ENST00000404970 FBXO40Q9UH90 709 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 SLC12A7Q9Y666 1083 aa16.35■□□□□ 0.21
VAMP2-202ENST00000404970 KLF18A0A0U1RQI7 1052 aa16.34■□□□□ 0.21
VAMP2-202ENST00000404970 SOWAHBA6NEL2 793 aa16.34■□□□□ 0.21
VAMP2-202ENST00000404970 DHX16O60231 1041 aaKnown RBP16.34■□□□□ 0.21
VAMP2-202ENST00000404970 CCND3P30281 292 aaPredicted RBP16.34■□□□□ 0.21
VAMP2-202ENST00000404970 RUFY3Q7L099 469 aa16.34■□□□□ 0.21
VAMP2-202ENST00000404970 FAM133AQ8N9E0 248 aa16.34■□□□□ 0.21
VAMP2-202ENST00000404970 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
VAMP2-202ENST00000404970 TM6SF1Q9BZW5 370 aa16.34■□□□□ 0.21
VAMP2-202ENST00000404970 PAK6Q9NQU5 681 aaPredicted RBP16.34■□□□□ 0.21
VAMP2-202ENST00000404970 CYP39A1Q9NYL5 469 aa16.34■□□□□ 0.21
VAMP2-202ENST00000404970 EN2P19622 333 aaPredicted RBP16.33■□□□□ 0.2
VAMP2-202ENST00000404970 CDC27P30260 824 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 UBXN2AP68543 259 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 FUT2Q10981 343 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 NSMFQ6X4W1 530 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 HOMER1Q86YM7 354 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 ANKRD35Q8N283 1001 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 FBXL16Q8N461 479 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 FANCBQ8NB91 859 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 PIBF1Q8WXW3 757 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 LARP6Q9BRS8 491 aaKnown RBP16.33■□□□□ 0.2
VAMP2-202ENST00000404970 SPZ1Q9BXG8 430 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.33■□□□□ 0.2
VAMP2-202ENST00000404970 RNF208Q9H0X6 261 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 NID2Q14112 1375 aa16.33■□□□□ 0.2
VAMP2-202ENST00000404970 hCG_1642624A0A1W2PR95 340 aa16.32■□□□□ 0.2
VAMP2-202ENST00000404970 ZBTB5O15062 677 aa16.32■□□□□ 0.2
VAMP2-202ENST00000404970 CYBAP13498 195 aa16.32■□□□□ 0.2
VAMP2-202ENST00000404970 PSMA5P28066 241 aa16.32■□□□□ 0.2
VAMP2-202ENST00000404970 PRAMEF19Q5SWL8 479 aa16.32■□□□□ 0.2
VAMP2-202ENST00000404970 FBXO11Q86XK2 927 aa16.32■□□□□ 0.2
VAMP2-202ENST00000404970 TRMT44Q8IYL2 757 aaKnown RBP16.32■□□□□ 0.2
VAMP2-202ENST00000404970 CTCFLQ8NI51 663 aaPredicted RBP16.32■□□□□ 0.2
VAMP2-202ENST00000404970 DDX11Q96FC9 970 aa16.32■□□□□ 0.2
VAMP2-202ENST00000404970 CNTNAP5Q8WYK1 1306 aa16.32■□□□□ 0.2
VAMP2-202ENST00000404970 ZBTB43O43298 467 aa16.31■□□□□ 0.2
VAMP2-202ENST00000404970 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
VAMP2-202ENST00000404970 COL20A1Q9P218 1284 aa16.31■□□□□ 0.2
VAMP2-202ENST00000404970 DIS3Q9Y2L1 958 aaKnown RBP16.31■□□□□ 0.2
VAMP2-202ENST00000404970 CYP46A1Q9Y6A2 500 aa16.31■□□□□ 0.2
VAMP2-202ENST00000404970 PFASO15067 1338 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 ABCB11O95342 1321 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 RPTORQ8N122 1335 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 GOLGA8AA7E2F4 631 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 GOLGA8BA8MQT2 603 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 SNAI1O95863 264 aaPredicted RBP16.3■□□□□ 0.2
VAMP2-202ENST00000404970 CALM1P0DP23 149 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 CALM2P0DP24 149 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 CALM3P0DP25 149 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 KIF5BP33176 963 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 EVCP57679 992 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 ANAPC15P60006 121 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 CCDC82Q8N4S0 544 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 TINF2Q9BSI4 451 aa16.3■□□□□ 0.2
VAMP2-202ENST00000404970 ALPK3Q96L96 1907 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 POTEB2H3BUK9 544 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 GJB1P08034 283 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 RPS6P62753 249 aaKnown RBP16.29■□□□□ 0.2
VAMP2-202ENST00000404970 RTN1Q16799 776 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 MFSD14CQ5VZR4 134 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 MAMDC4Q6UXC1 1216 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 DEFB118Q96PH6 123 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 KIF2CQ99661 725 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 AMNQ9BXJ7 453 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 KATNBL1Q9H079 304 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 PNMA6FA0A0J9YX94 578 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 PTPDC1A2A3K4 754 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 EIF5BO60841 1220 aaKnown RBP16.29■□□□□ 0.2
VAMP2-202ENST00000404970 ADD1P35611 737 aaKnown RBP16.29■□□□□ 0.2
VAMP2-202ENST00000404970 GJA8P48165 433 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 LHX8Q68G74 356 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 ZNF467Q7Z7K2 595 aaPredicted RBP16.29■□□□□ 0.2
VAMP2-202ENST00000404970 U2AF1L4Q8WU68 220 aaKnown RBP16.29■□□□□ 0.2
VAMP2-202ENST00000404970 CRISPLD2Q9H0B8 497 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 NCOA5Q9HCD5 579 aaKnown RBP16.29■□□□□ 0.2
VAMP2-202ENST00000404970 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
VAMP2-202ENST00000404970 PDRG1Q9NUG6 133 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 SLC5A4Q9NY91 659 aa16.29■□□□□ 0.2
VAMP2-202ENST00000404970 PCDHA1Q9Y5I3 950 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms