RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 IL31Q6EBC2 164 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 C12orf40Q86WS4 652 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 DRC7Q8IY82 874 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 C3orf58Q8NDZ4 430 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 RIN3Q8TB24 985 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 MTMR8Q96EF0 704 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 NECAB3Q96P71 396 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-204ENST00000396464 PRDM5Q9NQX1 630 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-204ENST00000396464 AASDHPPTQ9NRN7 309 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 GOLGA6AQ9NYA3 693 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 LUZP4Q9P127 313 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 ZNF69Q9UC07 566 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 PCDHA4Q9UN74 947 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 PPP2R3BQ9Y5P8 575 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 E2F8A0AVK6 867 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 B2RBV5 119 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 FANCGO15287 622 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 SRGNP10124 158 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 AFMP43652 599 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 CLCN7P51798 805 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 ZNF252P-AS1Q0IIN9 211 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 CBX2Q14781 532 aaPredicted RBP6.17□□□□□ -1.42
GABPB1-204ENST00000396464 MLANAQ16655 118 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 ALFQ53S48 1182 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 CCDC70Q6NSX1 233 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 LLGL2Q6P1M3 1020 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 SLITRK4Q8IW52 837 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 PHC3Q8NDX5 983 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 FOXQ1Q9C009 403 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 TLR6Q9Y2C9 796 aa6.17□□□□□ -1.42
GABPB1-204ENST00000396464 TCERG1O14776 1098 aaKnown RBP6.16□□□□□ -1.42
GABPB1-204ENST00000396464 EYA4O95677 639 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 PF4P02776 101 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 TRIM27P14373 513 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 SNAP47Q5SQN1 464 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 MPZL3Q6UWV2 235 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 NECAB2Q7Z6G3 386 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 STRA8Q7Z7C7 330 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 ANKRD42Q8N9B4 389 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 GOLM1Q8NBJ4 401 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 ZNF507Q8TCN5 953 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 GRIN3AQ8TCU5 1115 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 NGRNQ9NPE2 291 aaKnown RBP6.16□□□□□ -1.42
GABPB1-204ENST00000396464 ZNF180Q9UJW8 692 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 PPM1HQ9ULR3 514 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 MAPRE3Q9UPY8 281 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 DYTNA2CJ06 578 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 VSTM5A8MXK1 200 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 RAPGEF3O95398 923 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 NBPF7P0C2Y1 421 aaPredicted RBP6.16□□□□□ -1.42
GABPB1-204ENST00000396464 FAM153BP0C7A2 387 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 HTR3AP46098 478 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 SEZ6Q53EL9 994 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 ZBTB37Q5TC79 503 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 FBXW10Q5XX13 1052 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 MPRIPQ6WCQ1 1025 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 ARMCX6Q7L4S7 300 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 ZBTB46Q86UZ6 589 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 MORC1Q86VD1 984 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 SPACA3Q8IXA5 215 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 SMAP1Q8IYB5 467 aaPredicted RBP6.16□□□□□ -1.42
GABPB1-204ENST00000396464 CPXCR1Q8N123 301 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 ST13P5Q8NFI4 369 aaPredicted RBP6.16□□□□□ -1.42
GABPB1-204ENST00000396464 CHMP4CQ96CF2 233 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 TIFAQ96CG3 184 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 CDC5LQ99459 802 aaKnown RBP6.16□□□□□ -1.42
GABPB1-204ENST00000396464 YIPF4Q9BSR8 244 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 CCDC8Q9H0W5 538 aaPredicted RBP6.16□□□□□ -1.42
GABPB1-204ENST00000396464 OBP2AQ9NY56 170 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 USP25Q9UHP3 1055 aa6.16□□□□□ -1.42
GABPB1-204ENST00000396464 PRAMEF27A3QJZ7 478 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 RASSF10A6NK89 507 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 FBXO24O75426 580 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 RNASEH2AO75792 299 aaKnown RBP6.15□□□□□ -1.43
GABPB1-204ENST00000396464 LRIG2O94898 1065 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 RLBP1P12271 317 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 RAP1GAPP47736 663 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 ITKQ08881 620 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 PICALMQ13492 652 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 LHFPL2Q6ZUX7 228 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 PASD1Q8IV76 773 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 BHLHE22Q8NFJ8 381 aaPredicted RBP6.15□□□□□ -1.43
GABPB1-204ENST00000396464 ANKRD24Q8TF21 1146 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 FERD3LQ96RJ6 166 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 CAMKK2Q96RR4 588 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 CRBNQ96SW2 442 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 PPP1R16BQ96T49 567 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 TARS2Q9BW92 718 aaKnown RBP6.15□□□□□ -1.43
GABPB1-204ENST00000396464 LMCD1Q9NZU5 365 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 PUF60Q9UHX1 559 aaKnown RBP6.15□□□□□ -1.43
GABPB1-204ENST00000396464 GTF2A1LQ9UNN4 478 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 KAT6BQ8WYB5 2073 aa6.15□□□□□ -1.43
GABPB1-204ENST00000396464 RPGRIP1LQ68CZ1 1315 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 ENC1O14682 589 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 RFPL3O75679 317 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 DDAH1O94760 285 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 BMP6P22004 513 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 SERPINB3P29508 390 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 CASP2P42575 452 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 LIG3P49916 1009 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms