RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PICALMQ13492 652 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 BSDC1Q9NW68 430 aaPredicted RBP14.72□□□□□ -0.05
NFKB1-202ENST00000394820 PACSIN2Q9UNF0 486 aaPredicted RBP14.72□□□□□ -0.05
NFKB1-202ENST00000394820 TRAF5O00463 557 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 TSPY3P0CV98 308 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 TSPY8P0CW00 308 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 FBXW10Q5XX13 1052 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 SRLQ86TD4 932 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 MAP3K14Q99558 947 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 TUBE1Q9UJT0 475 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 LRRIQ3A6PVS8 624 aaPredicted RBP14.72□□□□□ -0.05
NFKB1-202ENST00000394820 LDHBP07195 334 aaKnown RBP14.72□□□□□ -0.05
NFKB1-202ENST00000394820 UBLCP1Q8WVY7 318 aaPredicted RBP14.72□□□□□ -0.05
NFKB1-202ENST00000394820 SPAG5Q96R06 1193 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 ABHD10Q9NUJ1 306 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 AGPAT5Q9NUQ2 364 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 RMND1Q9NWS8 449 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 ZNF804BA4D1E1 1349 aa14.72□□□□□ -0.05
NFKB1-202ENST00000394820 FTCDO95954 541 aa14.71□□□□□ -0.05
NFKB1-202ENST00000394820 GYPCP04921 128 aa14.71□□□□□ -0.05
NFKB1-202ENST00000394820 PRCPP42785 496 aa14.71□□□□□ -0.05
NFKB1-202ENST00000394820 VAV2P52735 878 aa14.71□□□□□ -0.05
NFKB1-202ENST00000394820 GUCY2DQ02846 1103 aa14.71□□□□□ -0.05
NFKB1-202ENST00000394820 PPM1EQ8WY54 764 aa14.71□□□□□ -0.05
NFKB1-202ENST00000394820 RPGRQ92834 1020 aaKnown RBP14.71□□□□□ -0.05
NFKB1-202ENST00000394820 TUBGCP2Q9BSJ2 902 aa14.71□□□□□ -0.05
NFKB1-202ENST00000394820 FBXO2Q9UK22 296 aaPredicted RBP14.71□□□□□ -0.05
NFKB1-202ENST00000394820 SRPRBQ9Y5M8 271 aaKnown RBP14.71□□□□□ -0.05
NFKB1-202ENST00000394820 E7EVH7 732 aa14.71□□□□□ -0.06
NFKB1-202ENST00000394820 CT47A1Q5JQC4 288 aaPredicted RBP14.71□□□□□ -0.06
NFKB1-202ENST00000394820 RASGRP2Q7LDG7 609 aa14.71□□□□□ -0.06
NFKB1-202ENST00000394820 CALML4Q96GE6 196 aa14.71□□□□□ -0.06
NFKB1-202ENST00000394820 CCDC114Q96M63 670 aa14.71□□□□□ -0.06
NFKB1-202ENST00000394820 CAPS2Q9BXY5 557 aa14.71□□□□□ -0.06
NFKB1-202ENST00000394820 SEC63Q9UGP8 760 aaKnown RBP14.71□□□□□ -0.06
NFKB1-202ENST00000394820 RTL9Q8NET4 1388 aa14.71□□□□□ -0.06
NFKB1-202ENST00000394820 WNT7AO00755 349 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 EZH2Q15910 746 aaKnown RBP14.7□□□□□ -0.06
NFKB1-202ENST00000394820 WHAMMP3Q1A5X7 153 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 FAM196AQ6ZSG2 479 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 FAM71BQ8TC56 605 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 MCM3P25205 808 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 EHHADHQ08426 723 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 NFIXQ14938 502 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 CCDC93Q567U6 631 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 ARHGEF1Q92888 912 aaKnown RBP14.7□□□□□ -0.06
NFKB1-202ENST00000394820 DCP1AQ9NPI6 582 aaPredicted RBP14.7□□□□□ -0.06
NFKB1-202ENST00000394820 BIN2Q9UBW5 565 aaPredicted RBP14.7□□□□□ -0.06
NFKB1-202ENST00000394820 LOC102724159A0A0B4J2E5 919 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 TMEM110-MUSTN1A8MSY1 372 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 BUB1BO60566 1050 aaPredicted RBP14.7□□□□□ -0.06
NFKB1-202ENST00000394820 PLS1Q14651 629 aa14.7□□□□□ -0.06
NFKB1-202ENST00000394820 PWP2Q15269 919 aaKnown RBP14.7□□□□□ -0.06
NFKB1-202ENST00000394820 FANCGO15287 622 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 E2F5Q15329 346 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 NFRKBQ6P4R8 1299 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 SRBD1Q8N5C6 995 aaKnown RBP14.69□□□□□ -0.06
NFKB1-202ENST00000394820 NSUN4Q96CB9 384 aaKnown RBP14.69□□□□□ -0.06
NFKB1-202ENST00000394820 CCDC43Q96MW1 224 aaKnown RBP14.69□□□□□ -0.06
NFKB1-202ENST00000394820 BPIFA3Q9BQP9 254 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 RIOK1Q9BRS2 568 aaKnown RBP14.69□□□□□ -0.06
NFKB1-202ENST00000394820 WDR19Q8NEZ3 1342 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 UFL1O94874 794 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 ZRANB2O95218 330 aaKnown RBP eCLIP14.69□□□□□ -0.06
NFKB1-202ENST00000394820 IFT88Q13099 833 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 FCHSD1Q86WN1 690 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 DNAAF5Q86Y56 855 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 STAG2Q8N3U4 1231 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 DYDC1Q8WWB3 177 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 SELENOSQ9BQE4 189 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 SELENOOQ9BVL4 669 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 CEP104O60308 925 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 ERCC5P28715 1186 aaPredicted RBP14.69□□□□□ -0.06
NFKB1-202ENST00000394820 KIF5BP33176 963 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 ERVK-24P63145 666 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 NR1I3Q14994 352 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 DCAF17Q5H9S7 520 aaPredicted RBP14.69□□□□□ -0.06
NFKB1-202ENST00000394820 CEP85LQ5SZL2 805 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 TRAPPC3LQ5T215 181 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 CCDC25Q86WR0 208 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 FBXL16Q8N461 479 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 CNBD1Q8NA66 436 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 SH3RF3Q8TEJ3 882 aaPredicted RBP14.69□□□□□ -0.06
NFKB1-202ENST00000394820 FOXP1Q9H334 677 aaPredicted RBP14.69□□□□□ -0.06
NFKB1-202ENST00000394820 ANKZF1Q9H8Y5 726 aa14.69□□□□□ -0.06
NFKB1-202ENST00000394820 BMP2KQ9NSY1 1161 aaPredicted RBP14.69□□□□□ -0.06
NFKB1-202ENST00000394820 PNPLA7Q6ZV29 1317 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 PLEKP08567 350 aaPredicted RBP14.68□□□□□ -0.06
NFKB1-202ENST00000394820 BEND6Q5SZJ8 279 aaPredicted RBP14.68□□□□□ -0.06
NFKB1-202ENST00000394820 AMIGO3Q86WK7 504 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 JPH2Q9BR39 696 aaPredicted RBP14.68□□□□□ -0.06
NFKB1-202ENST00000394820 NYXQ9GZU5 481 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 EPB41L5Q9HCM4 733 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 USP21Q9UK80 565 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 A0A087X0B3 334 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 TCP11X2Q5H9J9 407 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 EHBP1Q8NDI1 1231 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 MS4A14Q96JA4 679 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.68□□□□□ -0.06
NFKB1-202ENST00000394820 SPATA31A5Q5VU36 1347 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms