RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 PRAMEF18Q5VWM3 479 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 DPY19L2Q6NUT2 758 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 STOX1Q6ZVD7 989 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.12■□□□□ 0.17
PSME4-201ENST00000389993 CD209Q9NNX6 404 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 FAM178BQ8IXR5 827 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 MRPL11Q9Y3B7 192 aaKnown RBP16.12■□□□□ 0.17
PSME4-201ENST00000389993 EIF2AK2P19525 551 aaKnown RBP16.12■□□□□ 0.17
PSME4-201ENST00000389993 ADAM9Q13443 819 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 ITPK1Q13572 414 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 SEL1L2Q5TEA6 688 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 MARCH10Q8NA82 808 aaPredicted RBP16.12■□□□□ 0.17
PSME4-201ENST00000389993 IFIH1Q9BYX4 1025 aaKnown RBP16.12■□□□□ 0.17
PSME4-201ENST00000389993 MROH2AA6NES4 1674 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 STX10O60499 249 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 CASP14P31944 242 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 TAF12Q16514 161 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 CERS3Q8IU89 383 aa16.12■□□□□ 0.17
PSME4-201ENST00000389993 SYNJ2BP-COX16A0A087WUM0 186 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 USP17L15C9J2P7 530 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 USP17L13C9JLJ4 530 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 USP17L11C9JVI0 530 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 USP17L18D6R9N7 530 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 USP17L22D6RA61 530 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 USP17L17D6RBQ6 530 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 USP17L19D6RCP7 530 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 USP17L20D6RJB6 530 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 NPR1P16066 1061 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 USP17L24Q0WX57 530 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 TNFAIP1Q13829 316 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 CDC37Q16543 378 aaPredicted RBP16.11■□□□□ 0.17
PSME4-201ENST00000389993 USP17L6PQ6QN14 398 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 COX16Q9P0S2 106 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 VPS41P49754 854 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 LRRC8AQ8IWT6 810 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 PNPLA6Q8IY17 1366 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 PP2D1A8MPX8 630 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 CUL4AQ13619 759 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 DALRD3Q5D0E6 543 aaKnown RBP16.11■□□□□ 0.17
PSME4-201ENST00000389993 CAPN12Q6ZSI9 719 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 PIGOQ8TEQ8 1089 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 MMS19Q96T76 1030 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 TEKT3Q9BXF9 490 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 FAM83BQ5T0W9 1011 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 DIP2AQ14689 1571 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 ATP1A3P13637 1013 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 DAAM2Q86T65 1068 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 CNOT6LQ96LI5 555 aaKnown RBP16.11■□□□□ 0.17
PSME4-201ENST00000389993 ISCA1Q9BUE6 129 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 TSGA10Q9BZW7 698 aa16.11■□□□□ 0.17
PSME4-201ENST00000389993 BMP3P12645 472 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 CAPN2P17655 700 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 LIG4P49917 911 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 GUCY2FP51841 1108 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 STAT2P52630 851 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 STAG2Q8N3U4 1231 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 UHMK1Q8TAS1 419 aaKnown RBP16.1■□□□□ 0.17
PSME4-201ENST00000389993 PLVAPQ9BX97 442 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 AS3MTQ9HBK9 375 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 RABGAP1Q9Y3P9 1069 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 XRCC5P13010 732 aaKnown RBP16.1■□□□□ 0.17
PSME4-201ENST00000389993 KLRK1P26718 216 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 KIFAP3Q92845 792 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 CEP95Q96GE4 821 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 AMNQ9BXJ7 453 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 POLGP54098 1239 aaPredicted RBP16.1■□□□□ 0.17
PSME4-201ENST00000389993 RBL2Q08999 1139 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 SEPT2Q15019 361 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 ODR4Q5SWX8 454 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 PPM1KQ8N3J5 372 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 ENAHQ8N8S7 591 aaPredicted RBP16.1■□□□□ 0.17
PSME4-201ENST00000389993 FAM84BQ96KN1 310 aaPredicted RBP16.1■□□□□ 0.17
PSME4-201ENST00000389993 SENP2Q9HC62 589 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 LRRN2O75325 713 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 PRPF6O94906 941 aaKnown RBP16.1■□□□□ 0.17
PSME4-201ENST00000389993 PLCG1P19174 1290 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 TXNRD1Q16881 649 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 TTLL6Q8N841 843 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 MASTLQ96GX5 879 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 CEP170BQ9Y4F5 1589 aaPredicted RBP16.1■□□□□ 0.17
PSME4-201ENST00000389993 C8orf74Q6P047 294 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 RIMS1Q86UR5 1692 aaKnown RBP16.1■□□□□ 0.17
PSME4-201ENST00000389993 INO80Q9ULG1 1556 aaPredicted RBP16.1■□□□□ 0.17
PSME4-201ENST00000389993 USP17L10C9JJH3 530 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 TICAM2Q86XR7 235 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 NOX5Q96PH1 765 aa16.1■□□□□ 0.17
PSME4-201ENST00000389993 RNF26Q9BY78 433 aaPredicted RBP16.1■□□□□ 0.17
PSME4-201ENST00000389993 MRPS25P82663 173 aaKnown RBP16.09■□□□□ 0.17
PSME4-201ENST00000389993 CC2D2BQ6DHV5 1058 aa16.09■□□□□ 0.17
PSME4-201ENST00000389993 ZBTB33Q86T24 672 aa16.09■□□□□ 0.17
PSME4-201ENST00000389993 FOXP1Q9H334 677 aaPredicted RBP16.09■□□□□ 0.17
PSME4-201ENST00000389993 WDR70Q9NW82 654 aa16.09■□□□□ 0.17
PSME4-201ENST00000389993 EXOC7Q9UPT5 735 aa16.09■□□□□ 0.17
PSME4-201ENST00000389993 GOLGA8IPA6NC78 632 aa16.09■□□□□ 0.17
PSME4-201ENST00000389993 POTEMA6NI47 508 aa16.09■□□□□ 0.17
PSME4-201ENST00000389993 GOLGA8JA6NMD2 632 aa16.09■□□□□ 0.17
PSME4-201ENST00000389993 ZMYND10O75800 440 aa16.09■□□□□ 0.17
PSME4-201ENST00000389993 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.09■□□□□ 0.17
PSME4-201ENST00000389993 NT5C3AQ9H0P0 336 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms