RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 CLK2P49760 499 aaKnown RBP28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 SNAP25P60880 206 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 CCDC174Q6PII3 467 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 OTUD5Q96G74 571 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 ZNF408Q9H9D4 720 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 PCDHB6Q9Y5E3 794 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 A0A0G2JLL6 359 aaPredicted RBP28.02■■■□□ 2.08
ECHDC3-201ENST00000379215 COG2Q14746 738 aa28.02■■■□□ 2.08
ECHDC3-201ENST00000379215 MOB2Q70IA6 237 aa28.02■■■□□ 2.08
ECHDC3-201ENST00000379215 PRRT2Q7Z6L0 340 aaPredicted RBP28.02■■■□□ 2.08
ECHDC3-201ENST00000379215 CLMNQ96JQ2 1002 aa28.02■■■□□ 2.08
ECHDC3-201ENST00000379215 PGBD1Q96JS3 809 aa28.02■■■□□ 2.08
ECHDC3-201ENST00000379215 BIN2Q9UBW5 565 aaPredicted RBP28.02■■■□□ 2.08
ECHDC3-201ENST00000379215 ATP2B1P20020 1258 aa28.01■■■□□ 2.07
ECHDC3-201ENST00000379215 DGKZQ13574 1117 aa28.01■■■□□ 2.07
ECHDC3-201ENST00000379215 CHADLQ6NUI6 762 aa28.01■■■□□ 2.07
ECHDC3-201ENST00000379215 CATSPERGQ6ZRH7 1159 aa28.01■■■□□ 2.07
ECHDC3-201ENST00000379215 C2orf69Q8N8R5 385 aa28.01■■■□□ 2.07
ECHDC3-201ENST00000379215 GBA2Q9HCG7 927 aaPredicted RBP28.01■■■□□ 2.07
ECHDC3-201ENST00000379215 PCDHA7Q9UN72 937 aa28.01■■■□□ 2.07
ECHDC3-201ENST00000379215 PIK3CDO00329 1044 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 FOSP01100 380 aaPredicted RBP28■■■□□ 2.07
ECHDC3-201ENST00000379215 OAZ1P54368 228 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 JAKMIP3Q5VZ66 844 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 SAMD1Q6SPF0 538 aaPredicted RBP28■■■□□ 2.07
ECHDC3-201ENST00000379215 NEK8Q86SG6 692 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 OPTNQ96CV9 577 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 SLC10A4Q96EP9 437 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 HOXC10Q9NYD6 342 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 CCPG1Q9ULG6 757 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 IRF6O14896 467 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 ADAMTS3O15072 1205 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 DSG3P32926 999 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 INF2Q27J81 1249 aa28■■■□□ 2.07
ECHDC3-201ENST00000379215 NOM1Q5C9Z4 860 aaKnown RBP28■■■□□ 2.07
ECHDC3-201ENST00000379215 KRI1Q8N9T8 703 aaKnown RBP28■■■□□ 2.07
ECHDC3-201ENST00000379215 ZNF526Q8TF50 670 aaPredicted RBP28■■■□□ 2.07
ECHDC3-201ENST00000379215 NAP1L4Q99733 375 aaKnown RBP28■■■□□ 2.07
ECHDC3-201ENST00000379215 CUTAO60888 179 aa27.99■■■□□ 2.07
ECHDC3-201ENST00000379215 FASTKD5Q7L8L6 764 aaKnown RBP27.99■■■□□ 2.07
ECHDC3-201ENST00000379215 LAD1O00515 517 aa27.98■■■□□ 2.07
ECHDC3-201ENST00000379215 VWA5AO00534 786 aa27.98■■■□□ 2.07
ECHDC3-201ENST00000379215 SAMD3Q8N6K7 520 aa27.98■■■□□ 2.07
ECHDC3-201ENST00000379215 TBCKQ8TEA7 893 aa27.98■■■□□ 2.07
ECHDC3-201ENST00000379215 CNKSR2Q8WXI2 1034 aa27.98■■■□□ 2.07
ECHDC3-201ENST00000379215 FERMT2Q96AC1 680 aa27.98■■■□□ 2.07
ECHDC3-201ENST00000379215 CELF2O95319 508 aaKnown RBP27.97■■■□□ 2.07
ECHDC3-201ENST00000379215 PABPC4Q13310 644 aaKnown RBP eCLIP27.97■■■□□ 2.07
ECHDC3-201ENST00000379215 CAVIN1Q6NZI2 390 aaKnown RBP27.97■■■□□ 2.07
ECHDC3-201ENST00000379215 CCDC73Q6ZRK6 1079 aa27.97■■■□□ 2.07
ECHDC3-201ENST00000379215 MRPS27Q92552 414 aaKnown RBP27.97■■■□□ 2.07
ECHDC3-201ENST00000379215 TMEM260Q9NX78 707 aa27.97■■■□□ 2.07
ECHDC3-201ENST00000379215 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.97■■■□□ 2.07
ECHDC3-201ENST00000379215 ADAMTS5Q9UNA0 930 aa27.97■■■□□ 2.07
ECHDC3-201ENST00000379215 LOC285556D6RIA3 1793 aa27.97■■■□□ 2.07
ECHDC3-201ENST00000379215 ZNF536O15090 1300 aa27.97■■■□□ 2.07
ECHDC3-201ENST00000379215 SPDYE3A6NKU9 549 aa27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 MEIS2O14770 477 aa27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 MARCKSP29966 332 aaPredicted RBP27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 HOXA7P31268 230 aaPredicted RBP27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 ATP2C1P98194 919 aaPredicted RBP27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 ZNF174Q15697 407 aa27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 UBE2SQ16763 222 aa27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 MCF2L2Q86YR7 1114 aa27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 PTPREP23469 700 aa27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 SNAPC2Q13487 334 aa27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 ARL6IP4Q66PJ3 421 aaKnown RBP27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 GADL1Q6ZQY3 521 aa27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 CCAR1Q8IX12 1150 aaKnown RBP27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 ZNF579Q8NAF0 562 aaKnown RBP27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 ATG4CQ96DT6 458 aa27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 SRPRBQ9Y5M8 271 aaKnown RBP27.96■■■□□ 2.07
ECHDC3-201ENST00000379215 GCOM1H8Y6P7 765 aaPredicted RBP27.95■■■□□ 2.06
ECHDC3-201ENST00000379215 POLR2MP0CAP2 368 aa27.95■■■□□ 2.06
ECHDC3-201ENST00000379215 CMA1P23946 247 aa27.95■■■□□ 2.06
ECHDC3-201ENST00000379215 MCM7P33993 719 aa27.95■■■□□ 2.06
ECHDC3-201ENST00000379215 AXDND1Q5T1B0 1012 aaPredicted RBP27.95■■■□□ 2.06
ECHDC3-201ENST00000379215 EHMT1Q9H9B1 1298 aa27.95■■■□□ 2.06
ECHDC3-201ENST00000379215 DDX19AQ9NUU7 478 aaKnown RBP27.95■■■□□ 2.06
ECHDC3-201ENST00000379215 MAP3K20Q9NYL2 800 aaKnown RBP27.95■■■□□ 2.06
ECHDC3-201ENST00000379215 AGTPBP1Q9UPW5 1226 aa27.95■■■□□ 2.06
ECHDC3-201ENST00000379215 PTPRFP10586 1907 aa27.94■■■□□ 2.06
ECHDC3-201ENST00000379215 ATP2A1O14983 1001 aa27.94■■■□□ 2.06
ECHDC3-201ENST00000379215 GCFC2P16383 781 aaKnown RBP27.94■■■□□ 2.06
ECHDC3-201ENST00000379215 USP17L6PQ6QN14 398 aa27.94■■■□□ 2.06
ECHDC3-201ENST00000379215 MB21D1Q8N884 522 aa27.94■■■□□ 2.06
ECHDC3-201ENST00000379215 ANO3Q9BYT9 981 aa27.94■■■□□ 2.06
ECHDC3-201ENST00000379215 MAF1Q9H063 256 aa27.94■■■□□ 2.06
ECHDC3-201ENST00000379215 FBXO2Q9UK22 296 aaPredicted RBP27.94■■■□□ 2.06
ECHDC3-201ENST00000379215 PTGDRQ13258 359 aa27.93■■■□□ 2.06
ECHDC3-201ENST00000379215 LETM2Q2VYF4 491 aa27.93■■■□□ 2.06
ECHDC3-201ENST00000379215 CCDC183Q5T5S1 534 aa27.93■■■□□ 2.06
ECHDC3-201ENST00000379215 FSIP1Q8NA03 581 aa27.93■■■□□ 2.06
ECHDC3-201ENST00000379215 AGBL1Q96MI9 1066 aa27.93■■■□□ 2.06
ECHDC3-201ENST00000379215 PARP14Q460N5 1801 aa27.93■■■□□ 2.06
ECHDC3-201ENST00000379215 OPLAHO14841 1288 aa27.92■■■□□ 2.06
ECHDC3-201ENST00000379215 CCNT1O60563 726 aaKnown RBP27.92■■■□□ 2.06
ECHDC3-201ENST00000379215 ITGBL1O95965 494 aaPredicted RBP27.92■■■□□ 2.06
ECHDC3-201ENST00000379215 USP11P51784 963 aa27.92■■■□□ 2.06
ECHDC3-201ENST00000379215 TKFCQ3LXA3 575 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms