RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SERPINA10Q9UK55 444 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 DAGLAQ9Y4D2 1042 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 STXBP3O00186 592 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 CASP1P29466 404 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 DPYDQ12882 1025 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 KLHL10Q6JEL2 608 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 HOMER1Q86YM7 354 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 MTMR14Q8NCE2 650 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 CCDC12Q8WUD4 166 aaPredicted RBP13.68□□□□□ -0.22
HMGCL-202ENST00000374487 RRP36Q96EU6 259 aaKnown RBP13.68□□□□□ -0.22
HMGCL-202ENST00000374487 SPZ1Q9BXG8 430 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 ZNF70Q9UC06 446 aaPredicted RBP13.68□□□□□ -0.22
HMGCL-202ENST00000374487 SEC63Q9UGP8 760 aaKnown RBP13.68□□□□□ -0.22
HMGCL-202ENST00000374487 PCDHA6Q9UN73 950 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 PCDHA8Q9Y5H6 950 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 NAPAP54920 295 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 GRM1Q13255 1194 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 IL17AQ16552 155 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 DTHD1Q6ZMT9 781 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 STAMQ92783 540 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 TEKT1Q969V4 418 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 ABT1Q9ULW3 272 aaKnown RBP13.68□□□□□ -0.22
HMGCL-202ENST00000374487 SUGT1Q9Y2Z0 365 aa13.68□□□□□ -0.22
HMGCL-202ENST00000374487 NAV1Q8NEY1 1877 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 TMEM232C9JQI7 657 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 ZNF18P17022 549 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 INF2Q27J81 1249 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 SLC35G1Q2M3R5 365 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 FAM177A1Q8N128 213 aaPredicted RBP13.67□□□□□ -0.22
HMGCL-202ENST00000374487 DAGLBQ8NCG7 672 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 CCDC112Q8NEF3 446 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 RASSF8Q8NHQ8 419 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 TSC1Q92574 1164 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 MAP7D2Q96T17 732 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 DEFB129Q9H1M3 183 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 PDCL3Q9H2J4 239 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 CPVLQ9H3G5 476 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 CREBZFQ9NS37 354 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 KCND1Q9NSA2 647 aa13.67□□□□□ -0.22
HMGCL-202ENST00000374487 SAMSN1Q9NSI8 373 aaKnown RBP13.67□□□□□ -0.22
HMGCL-202ENST00000374487 M0R2N6 131 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 NYAP1Q6ZVC0 841 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 MTERF4Q7Z6M4 381 aaKnown RBP13.66□□□□□ -0.22
HMGCL-202ENST00000374487 C4orf32Q8N8J7 132 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 TMEM39BQ9GZU3 492 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 C6orf50Q9HD87 102 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 SLURP2P0DP57 97 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 GNA11P29992 359 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 CDC25AP30304 524 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 STAT6P42226 847 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 KCNJ6P48051 423 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 E2F4Q16254 413 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 SPATA1Q5VX52 437 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 RASGRP2Q7LDG7 609 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 ZDHHC15Q96MV8 337 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 BLZF1Q9H2G9 400 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 SYNRGQ9UMZ2 1314 aa13.66□□□□□ -0.22
HMGCL-202ENST00000374487 SMCO2A6NFE2 343 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 KIF2AO00139 706 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-202ENST00000374487 STX17P56962 302 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 NFIAQ12857 509 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 RASA3Q14644 834 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 PTPN21Q16825 1174 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 NBPF12Q5TAG4 269 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-202ENST00000374487 E4F1Q66K89 784 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-202ENST00000374487 SPECC1LQ69YQ0 1117 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 CDC42EP5Q6NZY7 148 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 PDXDC2PQ6P474 469 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 ZFPM1Q8IX07 1006 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 SMYD4Q8IYR2 804 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-202ENST00000374487 MED15Q96RN5 788 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 ZMYND12Q9H0C1 365 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 USP40Q9NVE5 1235 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 USP17L5A8MUK1 530 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 LAD1O00515 517 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 GTPBP6O43824 516 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-202ENST00000374487 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
HMGCL-202ENST00000374487 SMARCA1P28370 1054 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 UBA7P41226 1012 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 TCP10Q12799 353 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 CYP4F22Q6NT55 531 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 HHIPL2Q6UWX4 724 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 KRT25Q7Z3Z0 450 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 KIF18AQ8NI77 898 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 INTS13Q9NVM9 706 aa13.65□□□□□ -0.22
HMGCL-202ENST00000374487 PITPNM2Q9BZ72 1349 aa13.65□□□□□ -0.23
HMGCL-202ENST00000374487 CCP110O43303 1012 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 CUL4BQ13620 913 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 KARSQ15046 597 aaKnown RBP13.64□□□□□ -0.23
HMGCL-202ENST00000374487 PAXIP1Q6ZW49 1069 aaPredicted RBP13.64□□□□□ -0.23
HMGCL-202ENST00000374487 SAPCD2Q86UD0 394 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 PPP1R13BQ96KQ4 1090 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 UBA5Q9GZZ9 404 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 RMND1Q9NWS8 449 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 MTMR4Q9NYA4 1195 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 SERPINB13Q9UIV8 391 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 CNTNAP1P78357 1384 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms