RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 MPHOSPH10O00566 681 aaKnown RBP9.65□□□□□ -0.86
YIPF3-201ENST00000372417 MBTPS2O43462 519 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 IQCF3P0C7M6 154 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 SHMT1P34896 483 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 TNFAIP2Q03169 654 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 SIGLEC14Q08ET2 396 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 COL19A1Q14993 1142 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 TCEAL5Q5H9L2 206 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 ARMCX2Q7L311 632 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 RPAINQ86UA6 219 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 WWC1Q8IX03 1113 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 SPICE1Q8N0Z3 855 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 MAGEB6Q8N7X4 407 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 RETREG2Q8NC44 543 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 NKD2Q969F2 451 aaPredicted RBP9.65□□□□□ -0.86
YIPF3-201ENST00000372417 RAD9AQ99638 391 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 AP5M1Q9H0R1 490 aa9.65□□□□□ -0.86
YIPF3-201ENST00000372417 USP24Q9UPU5 2620 aa9.65□□□□□ -0.87
YIPF3-201ENST00000372417 DNAJC25-GNG10A0A024R161 153 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.64□□□□□ -0.87
YIPF3-201ENST00000372417 PITPNM1O00562 1244 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 WDR46O15213 610 aaKnown RBP9.64□□□□□ -0.87
YIPF3-201ENST00000372417 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
YIPF3-201ENST00000372417 GJB5O95377 273 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 USP5P45974 858 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 DEFB103AP81534 67 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 CLUL1Q15846 466 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 MCTP2Q6DN12 878 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 ADGRA1Q86SQ6 560 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 TTC6Q86TZ1 520 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 C17orf80Q9BSJ5 609 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 USP44Q9H0E7 712 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 NSUN3Q9H649 340 aaKnown RBP9.64□□□□□ -0.87
YIPF3-201ENST00000372417 SH2D4AQ9H788 454 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 ZNF214Q9UL59 606 aaPredicted RBP9.64□□□□□ -0.87
YIPF3-201ENST00000372417 ADAMTS5Q9UNA0 930 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 AKAP2Q9Y2D5 859 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 FAM208BQ5VWN6 2430 aa9.64□□□□□ -0.87
YIPF3-201ENST00000372417 SPTBN2O15020 2390 aa9.63□□□□□ -0.87
YIPF3-201ENST00000372417 MYH7BA7E2Y1 1941 aa9.63□□□□□ -0.87
YIPF3-201ENST00000372417 VWA5AO00534 786 aa9.63□□□□□ -0.87
YIPF3-201ENST00000372417 NCK2O43639 380 aa9.63□□□□□ -0.87
YIPF3-201ENST00000372417 ARID4AP29374 1257 aaPredicted RBP9.63□□□□□ -0.87
YIPF3-201ENST00000372417 MCAMP43121 646 aa9.63□□□□□ -0.87
YIPF3-201ENST00000372417 DYNLL1P63167 89 aaKnown RBP9.63□□□□□ -0.87
YIPF3-201ENST00000372417 SMAD4Q13485 552 aaKnown RBP9.63□□□□□ -0.87
YIPF3-201ENST00000372417 GORABQ5T7V8 394 aa9.63□□□□□ -0.87
YIPF3-201ENST00000372417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.63□□□□□ -0.87
YIPF3-201ENST00000372417 RMDN1Q96DB5 314 aa9.63□□□□□ -0.87
YIPF3-201ENST00000372417 NEUROD6Q96NK8 337 aa9.63□□□□□ -0.87
YIPF3-201ENST00000372417 KATNBL1Q9H079 304 aa9.63□□□□□ -0.87
YIPF3-201ENST00000372417 ARHGEF10LQ9HCE6 1279 aa9.63□□□□□ -0.87
YIPF3-201ENST00000372417 PA2G4Q9UQ80 394 aaKnown RBP9.63□□□□□ -0.87
YIPF3-201ENST00000372417 GNEQ9Y223 722 aaKnown RBP9.63□□□□□ -0.87
YIPF3-201ENST00000372417 ANKRD11Q6UB99 2663 aaPredicted RBP9.62□□□□□ -0.87
YIPF3-201ENST00000372417 FANCMQ8IYD8 2048 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 KIAA1671Q9BY89 1806 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 LTBRP36941 435 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 SNRNP48Q6IEG0 339 aaKnown RBP9.62□□□□□ -0.87
YIPF3-201ENST00000372417 FRMD5Q7Z6J6 570 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 CCDC144CPQ8IYA2 1237 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 REPS2Q8NFH8 660 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 COL26A1Q96A83 441 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 ASIC4Q96FT7 647 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 TEX13BQ9BXU2 312 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 VCPKMTQ9H867 229 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 FBXO28Q9NVF7 368 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 PPP1R9AQ9ULJ8 1098 aa9.62□□□□□ -0.87
YIPF3-201ENST00000372417 DYNC1LI2O43237 492 aaPredicted RBP9.61□□□□□ -0.87
YIPF3-201ENST00000372417 GPM6BQ13491 265 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 BFSP2Q13515 415 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 COL9A2Q14055 689 aaPredicted RBP9.61□□□□□ -0.87
YIPF3-201ENST00000372417 ST3GAL2Q16842 350 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 LRRFIP1Q32MZ4 808 aaKnown RBP9.61□□□□□ -0.87
YIPF3-201ENST00000372417 FAM47CQ5HY64 1035 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 FAM117BQ6P1L5 589 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 CNKSR3Q6P9H4 555 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 TMEM179Q6ZVK1 233 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 FGD4Q96M96 766 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 SAMD11Q96NU1 681 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 COPRSQ9NQ92 184 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 TMX2Q9Y320 296 aa9.61□□□□□ -0.87
YIPF3-201ENST00000372417 GREB1LQ9C091 1923 aaPredicted RBP9.6□□□□□ -0.87
YIPF3-201ENST00000372417 LOC730098B7Z3J9 87 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 UQCRFS1P1P0C7P4 283 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 PTGS1P23219 599 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 PLCD1P51178 756 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 ICA1Q05084 483 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 DLX2Q07687 328 aaPredicted RBP9.6□□□□□ -0.87
YIPF3-201ENST00000372417 TFCP2Q12800 502 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 MKRN4PQ13434 485 aaPredicted RBP9.6□□□□□ -0.87
YIPF3-201ENST00000372417 PUM1Q14671 1186 aaKnown RBP eCLIP9.6□□□□□ -0.87
YIPF3-201ENST00000372417 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 EPC2Q52LR7 807 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 CERS3Q8IU89 383 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 ANKRD35Q8N283 1001 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 CCDC155Q8N6L0 562 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 POLR3EQ9NVU0 708 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 CD207Q9UJ71 328 aa9.6□□□□□ -0.87
YIPF3-201ENST00000372417 INSL6Q9Y581 213 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms