RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 PCDHA1Q9Y5I3 950 aa17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 V9GY48 417 aaPredicted RBP17.97■□□□□ 0.47
PRPF38B-202ENST00000370022 FCER1AP12319 257 aa17.96■□□□□ 0.47
PRPF38B-202ENST00000370022 CTGFP29279 349 aa17.96■□□□□ 0.47
PRPF38B-202ENST00000370022 USH1GQ495M9 461 aa17.96■□□□□ 0.47
PRPF38B-202ENST00000370022 MRPL11Q9Y3B7 192 aaKnown RBP17.96■□□□□ 0.47
PRPF38B-202ENST00000370022 SLC15A5A6NIM6 579 aa17.96■□□□□ 0.46
PRPF38B-202ENST00000370022 PPP1R11O60927 126 aaPredicted RBP17.96■□□□□ 0.46
PRPF38B-202ENST00000370022 PTPREP23469 700 aa17.96■□□□□ 0.46
PRPF38B-202ENST00000370022 SSRP1Q08945 709 aaKnown RBP17.96■□□□□ 0.46
PRPF38B-202ENST00000370022 KCTD2Q14681 263 aa17.96■□□□□ 0.46
PRPF38B-202ENST00000370022 PIBF1Q8WXW3 757 aa17.96■□□□□ 0.46
PRPF38B-202ENST00000370022 HOMER2Q9NSB8 354 aa17.96■□□□□ 0.46
PRPF38B-202ENST00000370022 GRB14Q14449 540 aa17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 PFKFB3Q16875 520 aaPredicted RBP17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 MCF2L2Q86YR7 1114 aa17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 TNS4Q8IZW8 715 aa17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 NECAB1Q8N987 351 aa17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 RGS22Q8NE09 1264 aa17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 PHKBQ93100 1093 aa17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 MMP19Q99542 508 aa17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 NUDT12Q9BQG2 462 aa17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 LLPHQ9BRT6 129 aaKnown RBP17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 SLC26A6Q9BXS9 759 aa17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 SRRDQ9UH36 339 aa17.95■□□□□ 0.46
PRPF38B-202ENST00000370022 PFASO15067 1338 aa17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 STK36Q9NRP7 1315 aa17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 CD2BP2O95400 341 aaKnown RBP17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 MORN1Q5T089 497 aa17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 ANKRD35Q8N283 1001 aa17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 SAMD3Q8N6K7 520 aa17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 CLEC4DQ8WXI8 215 aa17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 SNX21Q969T3 373 aa17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 TMX3Q96JJ7 454 aa17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 SLC5A4Q9NY91 659 aa17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 TRIM17Q9Y577 477 aa17.94■□□□□ 0.46
PRPF38B-202ENST00000370022 ECM2O94769 699 aaPredicted RBP17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 DEXIO95424 95 aa17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 SCG2P13521 617 aa17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 CAP1Q01518 475 aa17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 MUM1L1Q5H9M0 696 aa17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 PPP1R18Q6NYC8 613 aa17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 OTOP1Q7RTM1 612 aa17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 CTU1Q7Z7A3 348 aaKnown RBP17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 TEX2Q8IWB9 1127 aa17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 DDX11Q96FC9 970 aa17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 MAP3K20Q9NYL2 800 aaKnown RBP17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 GJD2Q9UKL4 321 aa17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 MGAMO43451 1857 aa17.93■□□□□ 0.46
PRPF38B-202ENST00000370022 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
PRPF38B-202ENST00000370022 ADORA2AP29274 412 aa17.92■□□□□ 0.46
PRPF38B-202ENST00000370022 RGS2P41220 211 aa17.92■□□□□ 0.46
PRPF38B-202ENST00000370022 MAP2K5Q13163 448 aa17.92■□□□□ 0.46
PRPF38B-202ENST00000370022 PKN2Q16513 984 aaKnown RBP17.92■□□□□ 0.46
PRPF38B-202ENST00000370022 HEATR3Q7Z4Q2 680 aa17.92■□□□□ 0.46
PRPF38B-202ENST00000370022 CCDC83Q8IWF9 413 aa17.92■□□□□ 0.46
PRPF38B-202ENST00000370022 BARHL2Q9NY43 387 aa17.92■□□□□ 0.46
PRPF38B-202ENST00000370022 ZNF236Q9UL36 1845 aa17.92■□□□□ 0.46
PRPF38B-202ENST00000370022 NFIBO00712 420 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 CTDNEP1O95476 244 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 XRCC5P13010 732 aaKnown RBP17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 GHRHRQ02643 423 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 PRKCZQ05513 592 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 ST3GAL1Q11201 340 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 IRF5Q13568 498 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 PKN1Q16512 942 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 WWC2Q6AWC2 1192 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 FAM177A1Q8N128 213 aaPredicted RBP17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 NSUN7Q8NE18 718 aaKnown RBP17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 CCDC12Q8WUD4 166 aaPredicted RBP17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 WASF1Q92558 559 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 USP6NLQ92738 828 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 A1CFQ9NQ94 594 aaKnown RBP17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 CYP39A1Q9NYL5 469 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 PTPDC1A2A3K4 754 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 HOXC6P09630 235 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 TAL1P17542 331 aaPredicted RBP17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 FLT3LGP49771 235 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 NSMFQ6X4W1 530 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 RNF207Q6ZRF8 634 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 DPP9Q86TI2 863 aa17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 DIS3Q9Y2L1 958 aaKnown RBP17.91■□□□□ 0.46
PRPF38B-202ENST00000370022 MYH6P13533 1939 aa17.9■□□□□ 0.46
PRPF38B-202ENST00000370022 DNAJC25-GNG10A0A024R161 153 aa17.9■□□□□ 0.46
PRPF38B-202ENST00000370022 HMGN5P82970 282 aaKnown RBP17.9■□□□□ 0.46
PRPF38B-202ENST00000370022 TRMT44Q8IYL2 757 aaKnown RBP17.9■□□□□ 0.46
PRPF38B-202ENST00000370022 CCDC148Q8NFR7 591 aa17.9■□□□□ 0.46
PRPF38B-202ENST00000370022 GPKOWQ92917 476 aaPredicted RBP eCLIP17.9■□□□□ 0.464e-9■■■■■ 27.3
PRPF38B-202ENST00000370022 APBA2Q99767 749 aa17.9■□□□□ 0.46
PRPF38B-202ENST00000370022 GLT8D2Q9H1C3 349 aa17.9■□□□□ 0.46
PRPF38B-202ENST00000370022 SH3GLB2Q9NR46 395 aa17.9■□□□□ 0.46
PRPF38B-202ENST00000370022 GABRQQ9UN88 632 aa17.9■□□□□ 0.46
PRPF38B-202ENST00000370022 BAZ2BQ9UIF8 2168 aaKnown RBP17.9■□□□□ 0.46
PRPF38B-202ENST00000370022 ZSWIM8A7E2V4 1837 aa17.89■□□□□ 0.46
PRPF38B-202ENST00000370022 PLXNB2O15031 1838 aa17.89■□□□□ 0.46
PRPF38B-202ENST00000370022 POTEB2H3BUK9 544 aa17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 K7ELQ4 463 aaPredicted RBP17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 STXBP3O00186 592 aa17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 OPLAHO14841 1288 aa17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 CAPN15O75808 1086 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms