RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 SCRN1Q12765 414 aa7.83□□□□□ -1.16
RAB5B-201ENST00000360299 CCDC84Q86UT8 332 aaPredicted RBP7.83□□□□□ -1.16
RAB5B-201ENST00000360299 SLFN12Q8IYM2 578 aa7.83□□□□□ -1.16
RAB5B-201ENST00000360299 ABI1Q8IZP0 508 aa7.83□□□□□ -1.16
RAB5B-201ENST00000360299 ZKSCAN4Q969J2 545 aaPredicted RBP7.83□□□□□ -1.16
RAB5B-201ENST00000360299 CDCA5Q96FF9 252 aa7.83□□□□□ -1.16
RAB5B-201ENST00000360299 MMP19Q99542 508 aa7.83□□□□□ -1.16
RAB5B-201ENST00000360299 KIAA1468Q9P260 1216 aa7.83□□□□□ -1.16
RAB5B-201ENST00000360299 MRVI1Q9Y6F6 885 aa7.83□□□□□ -1.16
RAB5B-201ENST00000360299 PPP6R2O75170 966 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 HARSP12081 509 aaKnown RBP7.82□□□□□ -1.16
RAB5B-201ENST00000360299 DNM2P50570 870 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 ALX1Q15699 326 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 RSPH3Q86UC2 560 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 MSANTD4Q8NCY6 345 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 RBSNQ9H1K0 784 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 CUEDC2Q9H467 287 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 CTAGE15A4D2H0 777 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 CTAGE8P0CG41 777 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 FCER1AP12319 257 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 EPHA10Q5JZY3 1008 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 NEK8Q86SG6 692 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 CTAGE6Q86UF2 777 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 CTAGE4Q8IX94 777 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 FAM84BQ96KN1 310 aaPredicted RBP7.82□□□□□ -1.16
RAB5B-201ENST00000360299 IFT74Q96LB3 600 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 USP28Q96RU2 1077 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 POLR3EQ9NVU0 708 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 UBN2Q6ZU65 1347 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 CTAGE9A4FU28 777 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 LONP1P36776 959 aaKnown RBP7.82□□□□□ -1.16
RAB5B-201ENST00000360299 FBXO11Q86XK2 927 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 DGKHQ86XP1 1220 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 CSGALNACT2Q8N6G5 542 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 OPTNQ96CV9 577 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 STRBPQ96SI9 672 aaKnown RBP7.82□□□□□ -1.16
RAB5B-201ENST00000360299 KIF2CQ99661 725 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 NOC4LQ9BVI4 516 aaKnown RBP7.82□□□□□ -1.16
RAB5B-201ENST00000360299 NUCKS1Q9H1E3 243 aaKnown RBP7.82□□□□□ -1.16
RAB5B-201ENST00000360299 PSTPIP2Q9H939 334 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 NR2E3Q9Y5X4 410 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 GCOM1H8Y6P7 765 aaPredicted RBP7.82□□□□□ -1.16
RAB5B-201ENST00000360299 M0R2C6 588 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 POLR2MP0CAP2 368 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 BMP3P12645 472 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 STAT2P52630 851 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 FANCCQ00597 558 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 NSUN7Q8NE18 718 aaKnown RBP7.82□□□□□ -1.16
RAB5B-201ENST00000360299 TIGD1Q96MW7 591 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 FAM193BQ96PV7 902 aaPredicted RBP7.82□□□□□ -1.16
RAB5B-201ENST00000360299 CBX8Q9HC52 389 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 DNAI1Q9UI46 699 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 H0YHG0 523 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 GNA14O95837 355 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 TTLL1O95922 423 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 SLC39A14Q15043 492 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 HOOK3Q86VS8 718 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 ANKRD13CQ8N6S4 541 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 BAG1Q99933 345 aaPredicted RBP7.82□□□□□ -1.16
RAB5B-201ENST00000360299 GPRC5DQ9NZD1 345 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 SYNRGQ9UMZ2 1314 aa7.82□□□□□ -1.16
RAB5B-201ENST00000360299 SH2B2O14492 632 aaPredicted RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 KIAA0754O94854 1291 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 CTNNA2P26232 953 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 SLC16A2P36021 539 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 NUDT12Q9BQG2 462 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 PUS7LQ9H0K6 701 aaKnown RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 LRP6O75581 1613 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 MYZAPP0CAP1 466 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 GCFC2P16383 781 aaKnown RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 KIAA0753Q2KHM9 967 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 HERC4Q5GLZ8 1057 aaPredicted RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 SNRNP48Q6IEG0 339 aaKnown RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 PPM1EQ8WY54 764 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 AK8Q96MA6 479 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 ALDH8A1Q9H2A2 487 aaPredicted RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 CEP83Q9Y592 693 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 GOLGA6L7A0A1B0GV03 622 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 USP17L15C9J2P7 530 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 USP17L13C9JLJ4 530 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 USP17L11C9JVI0 530 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 USP17L18D6R9N7 530 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 USP17L22D6RA61 530 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 USP17L17D6RBQ6 530 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 USP17L19D6RCP7 530 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 USP17L20D6RJB6 530 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 FKTNO75072 461 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 GADD45BO75293 160 aaPredicted RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 SLU7O95391 586 aaKnown RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 CD2BP2O95400 341 aaKnown RBP7.81□□□□□ -1.16
RAB5B-201ENST00000360299 OR52Z1P0C646 297 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 PFKFB1P16118 471 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 ACTN2P35609 894 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 ZNF75DP51815 510 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 USP17L24Q0WX57 530 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 FAM83BQ5T0W9 1011 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 IGSF22Q8N9C0 903 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 AMNQ9BXJ7 453 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 CENPHQ9H3R5 247 aa7.81□□□□□ -1.16
RAB5B-201ENST00000360299 RABGAP1Q9Y3P9 1069 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms