RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 A6NNZ2 444 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 SLC16A2P36021 539 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 ABCB5Q2M3G0 1257 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 TUBB8Q3ZCM7 444 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 HHATQ5VTY9 493 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 SAMSN1Q9NSI8 373 aaKnown RBP17.61■□□□□ 0.41
PTPN11-201ENST00000351677 USP17L8P0C7I0 530 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 TRAPPC10P48553 1259 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 UBXN2AP68543 259 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 CACNB1Q02641 598 aaPredicted RBP17.6■□□□□ 0.41
PTPN11-201ENST00000351677 RASGRF1Q13972 1273 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 LARP4BQ92615 738 aaKnown RBP17.6■□□□□ 0.41
PTPN11-201ENST00000351677 HOOK2Q96ED9 719 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 GAS8O95995 478 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 ITIH3Q06033 890 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 CCDC127Q96BQ5 260 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 DYNLL2Q96FJ2 89 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 TEKT3Q9BXF9 490 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 GJB4Q9NTQ9 266 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 MAP3K4Q9Y6R4 1608 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 ANKARQ7Z5J8 1434 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 HSPA1LP34931 641 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 PABPC4Q13310 644 aaKnown RBP eCLIP17.6■□□□□ 0.411e-94■■■■■ 156.1
PTPN11-201ENST00000351677 IWS1Q96ST2 819 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 LEMD3Q9Y2U8 911 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 CLTCL1P53675 1640 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 IRX3P78415 501 aaPredicted RBP17.6■□□□□ 0.41
PTPN11-201ENST00000351677 VPS37BQ9H9H4 285 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 ABCC3O15438 1527 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 DLATP10515 647 aaKnown RBP17.6■□□□□ 0.41
PTPN11-201ENST00000351677 IFNAR1P17181 557 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 MCTP2Q6DN12 878 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 TBCKQ8TEA7 893 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 STMN2Q93045 179 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 PIGSQ96S52 555 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 FAM184BQ9ULE4 1060 aa17.6■□□□□ 0.41
PTPN11-201ENST00000351677 IGKV5-2P06315 115 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 VPS41P49754 854 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 ANKRD42Q8N9B4 389 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 PLCB1Q9NQ66 1216 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 TCP1P17987 556 aaKnown RBP17.59■□□□□ 0.41
PTPN11-201ENST00000351677 LIG4P49917 911 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 PPM1KQ8N3J5 372 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 RABGAP1Q9Y3P9 1069 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 ATP1A2P50993 1020 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 CCDC89Q8N998 374 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 ST7Q9NRC1 585 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 SLFN14P0C7P3 912 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 MCAMP43121 646 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 ATP11AP98196 1134 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 TOB2Q14106 344 aaPredicted RBP17.59■□□□□ 0.41
PTPN11-201ENST00000351677 CROCCP2Q86T23 111 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 PAGR1Q9BTK6 254 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 H7C1W4 665 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 PPEF1O14829 653 aaPredicted RBP17.59■□□□□ 0.41
PTPN11-201ENST00000351677 ZNF131P52739 623 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 GNGT1P63211 74 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 EHHADHQ08426 723 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 ARMCX5Q6P1M9 558 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 VSIG1Q86XK7 387 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 METTL13Q8N6R0 699 aa17.59■□□□□ 0.41
PTPN11-201ENST00000351677 LAD1O00515 517 aa17.58■□□□□ 0.41
PTPN11-201ENST00000351677 EXOC3L4Q17RC7 722 aa17.58■□□□□ 0.41
PTPN11-201ENST00000351677 POTEDQ86YR6 584 aa17.58■□□□□ 0.41
PTPN11-201ENST00000351677 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.41
PTPN11-201ENST00000351677 COA7Q96BR5 231 aa17.58■□□□□ 0.41
PTPN11-201ENST00000351677 SEC31AO94979 1220 aaKnown RBP17.58■□□□□ 0.41
PTPN11-201ENST00000351677 NAA35Q5VZE5 725 aa17.58■□□□□ 0.41
PTPN11-201ENST00000351677 CASC4Q6P4E1 433 aa17.58■□□□□ 0.41
PTPN11-201ENST00000351677 USP17L2Q6R6M4 530 aa17.58■□□□□ 0.41
PTPN11-201ENST00000351677 P2RX5Q93086 422 aa17.58■□□□□ 0.41
PTPN11-201ENST00000351677 NOD1Q9Y239 953 aa17.58■□□□□ 0.41
PTPN11-201ENST00000351677 IQGAP3Q86VI3 1631 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 ZSCAN26Q16670 478 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 ASPRV1Q53RT3 343 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 SUSD4Q5VX71 490 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 EPSTI1Q96J88 318 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 RGS16O15492 202 aaPredicted RBP17.58■□□□□ 0.4
PTPN11-201ENST00000351677 STK10O94804 968 aaKnown RBP17.58■□□□□ 0.4
PTPN11-201ENST00000351677 IFNB1P01574 187 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 H2AFZP0C0S5 128 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 ZNF658Q5TYW1 1059 aaPredicted RBP17.58■□□□□ 0.4
PTPN11-201ENST00000351677 FAM196AQ6ZSG2 479 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 H2AFVQ71UI9 128 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 GNPTABQ3T906 1256 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 SPATA24Q86W54 205 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 GOLGA5Q8TBA6 731 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 MAGEF1Q9HAY2 307 aa17.58■□□□□ 0.4
PTPN11-201ENST00000351677 METTL14Q9HCE5 456 aaKnown RBP17.58■□□□□ 0.4
PTPN11-201ENST00000351677 CLRN2A0PK11 232 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 CIB2O75838 187 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 TTLL1O95922 423 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 GEN1Q17RS7 908 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 UHMK1Q8TAS1 419 aaKnown RBP17.57■□□□□ 0.4
PTPN11-201ENST00000351677 CDC23Q9UJX2 597 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 CCPG1Q9ULG6 757 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 HLFQ16534 295 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 MAIP1Q8WWC4 291 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 AMNQ9BXJ7 453 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 MLXIPQ9HAP2 919 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms