RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 SYNGAP1Q96PV0 1343 aa13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 CCND3P30281 292 aaPredicted RBP13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 TROAPQ12815 778 aa13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 FBXO11Q86XK2 927 aa13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 MCF2L2Q86YR7 1114 aa13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 ZNF654Q8IZM8 581 aa13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 MPHOSPH6Q99547 160 aaKnown RBP13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 LZTS2Q9BRK4 669 aa13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 CRISPLD2Q9H0B8 497 aa13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 ADD3Q9UEY8 706 aaKnown RBP13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 DDX20Q9UHI6 824 aaKnown RBP13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 TRIOBPQ9H2D6 2365 aa13.17□□□□□ -0.3
SLC28A1-202ENST00000338602 ABCB11O95342 1321 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 CENPFP49454 3210 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 ASB14A6NK59 587 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 B4DLN1 442 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 FARP2O94887 1054 aaPredicted RBP13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 CYBAP13498 195 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 MRPL12P52815 198 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 USH1GQ495M9 461 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 BLOC1S2Q6QNY1 142 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 MAMDC4Q6UXC1 1216 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 STAG2Q8N3U4 1231 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 KCNB2Q92953 911 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 AMNQ9BXJ7 453 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 CPVLQ9H3G5 476 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 JMJD4Q9H9V9 463 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 MRPL11Q9Y3B7 192 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 ZNFX1Q9P2E3 1918 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-202ENST00000338602 PTPDC1A2A3K4 754 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 ZBTB5O15062 677 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 SEPT4O43236 478 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 IGHA2P01877 340 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 SMARCA1P28370 1054 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 QRICH1Q2TAL8 776 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 RNF207Q6ZRF8 634 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 FAM133AQ8N9E0 248 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 RGS22Q8NE09 1264 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 SHISA4Q96DD7 197 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 HTATIP2Q9BUP3 242 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 LRRC2Q9BYS8 371 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 SENP2Q9HC62 589 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 OGDHLQ9ULD0 1010 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 SNX14Q9Y5W7 946 aa13.15□□□□□ -0.3
SLC28A1-202ENST00000338602 LOC102724159A0A0B4J2E5 919 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 EXOSC10Q01780 885 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 CNTN2Q02246 1040 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 BAATQ14032 418 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 PWP2Q15269 919 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 PRAMEF19Q5SWL8 479 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 NECAB2Q7Z6G3 386 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 SGMS1Q86VZ5 419 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 HOMER1Q86YM7 354 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 ARRDC4Q8NCT1 418 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 ABHD16BQ9H3Z7 469 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 RIOX1Q9H6W3 641 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 GPHNQ9NQX3 736 aaPredicted RBP13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 SEC63Q9UGP8 760 aaKnown RBP13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
SLC28A1-202ENST00000338602 PNMA6FA0A0J9YX94 578 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 NFIBO00712 420 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 ZBTB43O43298 467 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 RARBP10826 455 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 AKR1A1P14550 325 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 CALML3P27482 149 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 LHX8Q68G74 356 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 TRPV1Q8NER1 839 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 CLEC4DQ8WXI8 215 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 MTMR8Q96EF0 704 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 RRP36Q96EU6 259 aaKnown RBP13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 MYL10Q9BUA6 226 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 USP26Q9BXU7 913 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 RBM28Q9NW13 759 aaKnown RBP13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 ZHX1Q9UKY1 873 aaPredicted RBP13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 NAP1L2Q9ULW6 460 aaPredicted RBP13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 PCDHA1Q9Y5I3 950 aa13.13□□□□□ -0.31
SLC28A1-202ENST00000338602 CASTP20810 708 aaKnown RBP13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 ACVR2BQ13705 512 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 PPP2R5BQ15173 497 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 ARMCX2Q7L311 632 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 MICU3Q86XE3 530 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 CCDC144CPQ8IYA2 1237 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 SAMD3Q8N6K7 520 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 DNERQ8NFT8 737 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 PIGSQ96S52 555 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 SPZ1Q9BXG8 430 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 MAP3K20Q9NYL2 800 aaKnown RBP13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 CEP290O15078 2479 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 PLXNA1Q9UIW2 1896 aa13.12□□□□□ -0.31
SLC28A1-202ENST00000338602 KLF18A0A0U1RQI7 1052 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms