RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 USP17L13C9JLJ4 530 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 USP17L11C9JVI0 530 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 USP17L18D6R9N7 530 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 USP17L22D6RA61 530 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 USP17L17D6RBQ6 530 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 USP17L19D6RCP7 530 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 USP17L20D6RJB6 530 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 IRF6O14896 467 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 LIG1P18858 919 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 USP17L24Q0WX57 530 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 TRAF1Q13077 416 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 LDLRAD1Q5T700 205 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 USP17L6PQ6QN14 398 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 RLFQ13129 1914 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 MCM7P33993 719 aa16.83■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CCAR1Q8IX12 1150 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-201ENST00000338399 TBCKQ8TEA7 893 aa16.83■□□□□ 0.28
CDK5RAP3-201ENST00000338399 MRVI1Q9Y6F6 885 aa16.83■□□□□ 0.28
CDK5RAP3-201ENST00000338399 OPLAHO14841 1288 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 AXDND1Q5T1B0 1012 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CATSPERGQ6ZRH7 1159 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CPXCR1Q8N123 301 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 OPTNQ96CV9 577 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 AGBL1Q96MI9 1066 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CLIC6Q96NY7 704 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 SLC38A10Q9HBR0 1119 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CCPG1Q9ULG6 757 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ZNF536O15090 1300 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 COL11A1P12107 1806 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 MYH7BA7E2Y1 1941 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 MEIS2O14770 477 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ICAM1P05362 532 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 PPIL2Q13356 520 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 NEK8Q86SG6 692 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 KRI1Q8N9T8 703 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 FSIP1Q8NA03 581 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ATG4CQ96DT6 458 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 GOLPH3LQ9H4A5 285 aa16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 RAVER2Q9HCJ3 691 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CTDP1Q9Y5B0 961 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-201ENST00000338399 A0A1W2PQ27 194 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 A0A1W2PQ64 194 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 A0A1W2PQD8 194 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 VWA5AO00534 786 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CXCL11O14625 94 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ZBED4O75132 1171 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 BMP15O95972 392 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 DSG3P32926 999 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 PTGDRQ13258 359 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 COG2Q14746 738 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 LETM2Q2VYF4 491 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 TREML2Q5T2D2 321 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 GADL1Q6ZQY3 521 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 SLC10A4Q96EP9 437 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 WNK4Q96J92 1243 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 GBA2Q9HCG7 927 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 FBXO2Q9UK22 296 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 MRPL11Q9Y3B7 192 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 LOC285556D6RIA3 1793 aa16.81■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ABCB11O95342 1321 aa16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 A0A0G2JLL6 359 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CUTAO60888 179 aa16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CELF2O95319 508 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 PTPREP23469 700 aa16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ATP2C1P98194 919 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 PRRT2Q7Z6L0 340 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 MRPS27Q92552 414 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 SYAP1Q96A49 352 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 KCNH4Q9UQ05 1017 aa16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 A0A1B0GVL5 298 aa16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CCNT1O60563 726 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 NR1I2O75469 434 aa16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 FDX1P10109 184 aa16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 HOXA13P31271 388 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 GRIN1Q05586 938 aa16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 TBC1D5Q92609 795 aa16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 P2RX7Q99572 595 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 DACT1Q9NYF0 836 aa16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 SRPRBQ9Y5M8 271 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 MORC2Q9Y6X9 1032 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CFBP00751 764 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CMA1P23946 247 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 GJA5P36382 358 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 FKBP1BP68106 108 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ZSCAN23Q3MJ62 389 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CHADLQ6NUI6 762 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 SHC4Q6S5L8 630 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CCDC73Q6ZRK6 1079 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 C4orf32Q8N8J7 132 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 C2orf69Q8N8R5 385 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 PROCA1Q8NCQ7 364 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ANO3Q9BYT9 981 aa16.79■□□□□ 0.28
CDK5RAP3-201ENST00000338399 UNCXA6NJT0 531 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 PIK3CDO00329 1044 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 EDIL3O43854 480 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ALAS1P13196 640 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 AP3B2Q13367 1082 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 HOXC10Q9NYD6 342 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ADAMTS5Q9UNA0 930 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms