RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 KANSL2Q9H9L4 492 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 JAG2Q9Y219 1238 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 KPNA2P52292 529 aaKnown RBP13.44□□□□□ -0.26
FN1-202ENST00000336916 HHATQ5VTY9 493 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 CEP85LQ5SZL2 805 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 FAM102BQ5T8I3 360 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 PANK4Q9NVE7 773 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 TBC1D8O95759 1140 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 HSPA2P54652 639 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 ASPHQ12797 758 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 BZW1Q7L1Q6 419 aaKnown RBP13.43□□□□□ -0.26
FN1-202ENST00000336916 MAPKAPK5Q8IW41 473 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 SCG2P13521 617 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 CDC37Q16543 378 aaPredicted RBP13.43□□□□□ -0.26
FN1-202ENST00000336916 TMEM206Q9H813 350 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 NPR1P16066 1061 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 RXRAP19793 462 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 EIF4A1P60842 406 aaKnown RBP13.43□□□□□ -0.26
FN1-202ENST00000336916 VPS16Q9H269 839 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 KLRF2D3W0D1 207 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 PIK3CAP42336 1068 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 FOXP1Q9H334 677 aaPredicted RBP13.43□□□□□ -0.26
FN1-202ENST00000336916 BCS1LQ9Y276 419 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 PPFIA2O75334 1257 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 CLCN1P35523 988 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 NDUFAF2Q8N183 169 aa13.43□□□□□ -0.26
FN1-202ENST00000336916 TRIM56Q9BRZ2 755 aaKnown RBP13.43□□□□□ -0.26
FN1-202ENST00000336916 CPSF3Q9UKF6 684 aaKnown RBP13.43□□□□□ -0.26
FN1-202ENST00000336916 MYH13Q9UKX3 1938 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 ZYXQ15942 572 aaKnown RBP13.42□□□□□ -0.26
FN1-202ENST00000336916 DBNDD2Q9BQY9 259 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 TLDC2A0PJX2 215 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 DDX39AO00148 427 aaKnown RBP13.42□□□□□ -0.26
FN1-202ENST00000336916 ZSCAN20P17040 1043 aaPredicted RBP13.42□□□□□ -0.26
FN1-202ENST00000336916 PTK2Q05397 1052 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 K7ENM7 598 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 S100BP04271 92 aaPredicted RBP13.42□□□□□ -0.26
FN1-202ENST00000336916 SERPINA10Q9UK55 444 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 ABCC12Q96J65 1359 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 TROVE2P10155 538 aaKnown RBP eCLIP13.42□□□□□ -0.26
FN1-202ENST00000336916 GOLGA8FQ08AF8 430 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 GOLGA8DPQ0D2H9 430 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 PI4KBQ9UBF8 816 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 FANCCQ00597 558 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 XKR9Q5GH70 373 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 LRCH2Q5VUJ6 765 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 LMNTD2Q8IXW0 634 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 SRRM1Q8IYB3 904 aaKnown RBP13.42□□□□□ -0.26
FN1-202ENST00000336916 RNF26Q9BY78 433 aaPredicted RBP13.42□□□□□ -0.26
FN1-202ENST00000336916 EDEM3Q9BZQ6 932 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 ERVK-7P63135 1459 aa13.42□□□□□ -0.26
FN1-202ENST00000336916 ESYT2A0FGR8 921 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 FAM160B2Q86V87 743 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 TRIM42Q8IWZ5 723 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 OR8K1Q8NGG5 319 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 BAG5Q9UL15 447 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 XPAP23025 273 aaPredicted RBP13.41□□□□□ -0.26
FN1-202ENST00000336916 CLEC4GQ6UXB4 293 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 PPP4R3CPQ6ZMV5 832 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 PDE8BO95263 885 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 IFNL3Q8IZI9 196 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 ORAI2Q96SN7 254 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 VPS18Q9P253 973 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 PPFIA3O75145 1194 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 TAF5LO75529 589 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 A1BGP04217 495 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 LRFN2Q9ULH4 789 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 MYH15Q9Y2K3 1946 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 MMS19Q96T76 1030 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 CARD14Q9BXL6 1004 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 QTRT2Q9H974 415 aaKnown RBP13.41□□□□□ -0.26
FN1-202ENST00000336916 HOXD10P28358 340 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 DALRD3Q5D0E6 543 aaKnown RBP13.41□□□□□ -0.26
FN1-202ENST00000336916 SDCCAG3Q96C92 435 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 PLIN2Q99541 437 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 EPS15L1Q9UBC2 864 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 TTLL3Q9Y4R7 772 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 ADCY9O60503 1353 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 WDR46O15213 610 aaKnown RBP13.41□□□□□ -0.26
FN1-202ENST00000336916 IGSF3O75054 1194 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 KRT15P19012 456 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 ANKRD20A3Q5VUR7 823 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 PAGR1Q9BTK6 254 aa13.41□□□□□ -0.26
FN1-202ENST00000336916 ADRA2BP18089 450 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 PRR16Q569H4 304 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 DNAJC10Q8IXB1 793 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 PCDHA1Q9Y5I3 950 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 CCDC93Q567U6 631 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 NCAPG2Q86XI2 1143 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 Q9H521 79 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 MAGEA1P43355 309 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 FBLN1P23142 703 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 ZNF496Q96IT1 587 aaPredicted RBP13.4□□□□□ -0.26
FN1-202ENST00000336916 KIAA1841Q6NSI8 718 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 RAB44Q7Z6P3 723 aaPredicted RBP13.4□□□□□ -0.26
FN1-202ENST00000336916 NFE2L3Q9Y4A8 694 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 TRIM62Q9BVG3 475 aa13.4□□□□□ -0.26
FN1-202ENST00000336916 SAR1BQ9Y6B6 198 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms