RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 USP17L19D6RCP7 530 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 USP17L20D6RJB6 530 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 MMP10P09238 476 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 ASIC1P78348 528 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 USP17L24Q0WX57 530 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 MCM6Q14566 821 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 CDC42EP5Q6NZY7 148 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
IDH3A-201ENST00000299518 MTERF4Q7Z6M4 381 aaKnown RBP12.55□□□□□ -0.4
IDH3A-201ENST00000299518 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
IDH3A-201ENST00000299518 TRIM47Q96LD4 638 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 AGPAT5Q9NUQ2 364 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 BBOX1O75936 387 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 OR52Z1P0C646 297 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 TXLNAP40222 546 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 NONOQ15233 471 aaKnown RBP eCLIP12.55□□□□□ -0.4
IDH3A-201ENST00000299518 CCDC96Q2M329 555 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 TEX35Q5T0J7 233 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 REXO1Q8N1G1 1221 aaKnown RBP12.55□□□□□ -0.4
IDH3A-201ENST00000299518 KIFC2Q96AC6 838 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 TBC1D7Q9P0N9 293 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.55□□□□□ -0.4
IDH3A-201ENST00000299518 MAST2Q6P0Q8 1798 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 ZNF831Q5JPB2 1677 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 TTC26A0AVF1 554 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 CHRNA5P30532 468 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 KRT9P35527 623 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 CLCN6P51797 869 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 PDE4DQ08499 809 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 ANKRD40Q6AI12 368 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 ADGRF4Q8IZF3 695 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 HINFPQ9BQA5 517 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 TCP11L1Q9NUJ3 509 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 TRPC5Q9UL62 973 aaPredicted RBP12.55□□□□□ -0.4
IDH3A-201ENST00000299518 FAM170AA1A519 330 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 G3V3G9 751 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 GDF11O95390 407 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 CASQ1P31415 396 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 ARL6IP4Q66PJ3 421 aaKnown RBP12.54□□□□□ -0.4
IDH3A-201ENST00000299518 KRT27Q7Z3Y8 459 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 NEK8Q86SG6 692 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 ADSSL1Q8N142 457 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 DDTLA6NHG4 134 aaPredicted RBP12.54□□□□□ -0.4
IDH3A-201ENST00000299518 SRGNP10124 158 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 ZSCAN20P17040 1043 aaPredicted RBP12.54□□□□□ -0.4
IDH3A-201ENST00000299518 SHMT1P34896 483 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 CCDC155Q8N6L0 562 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 RWDD2AQ9UIY3 292 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 GNAQP50148 359 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 ZNF569Q5MCW4 686 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 APOBEC3HQ6NTF7 200 aaKnown RBP12.54□□□□□ -0.4
IDH3A-201ENST00000299518 ZSCAN29Q8IWY8 852 aaPredicted RBP12.54□□□□□ -0.4
IDH3A-201ENST00000299518 MNS1Q8NEH6 495 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 CCDC34Q96HJ3 373 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 JMJD4Q9H9V9 463 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 KBTBD4Q9NVX7 518 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
IDH3A-201ENST00000299518 GAKO14976 1311 aa12.54□□□□□ -0.4
IDH3A-201ENST00000299518 IDEP14735 1019 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 DUSP9Q99956 384 aaKnown RBP12.53□□□□□ -0.4
IDH3A-201ENST00000299518 SPZ1Q9BXG8 430 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 FGFBP2Q9BYJ0 223 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 TRIM9Q9C026 710 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 BCAS3Q9H6U6 928 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 SH3GLB2Q9NR46 395 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 SERPINB13Q9UIV8 391 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 ENC1O14682 589 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 ZSCAN12O43309 604 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 JAG1P78504 1218 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 KIAA0895Q8NCT3 520 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 PDGFDQ9GZP0 370 aaPredicted RBP12.53□□□□□ -0.4
IDH3A-201ENST00000299518 C6orf50Q9HD87 102 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 ABHD10Q9NUJ1 306 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 SSBP05455 408 aaKnown RBP eCLIP12.53□□□□□ -0.4
IDH3A-201ENST00000299518 GABPAQ06546 454 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 FILIP1LQ4L180 1135 aa12.53□□□□□ -0.4
IDH3A-201ENST00000299518 NPHP3-ACAD11A0A0J9YXS1 232 aa12.52□□□□□ -0.4
IDH3A-201ENST00000299518 SPICE1Q8N0Z3 855 aa12.52□□□□□ -0.4
IDH3A-201ENST00000299518 CGNQ9P2M7 1197 aaKnown RBP12.52□□□□□ -0.4
IDH3A-201ENST00000299518 ATP6V0A2Q9Y487 856 aa12.52□□□□□ -0.4
IDH3A-201ENST00000299518 DUSP10Q9Y6W6 482 aa12.52□□□□□ -0.4
IDH3A-201ENST00000299518 MYMKA6NI61 221 aa12.52□□□□□ -0.4
IDH3A-201ENST00000299518 HOXA10P31260 410 aaPredicted RBP12.52□□□□□ -0.4
IDH3A-201ENST00000299518 APBA1Q02410 837 aa12.52□□□□□ -0.4
IDH3A-201ENST00000299518 CSGALNACT2Q8N6G5 542 aa12.52□□□□□ -0.4
IDH3A-201ENST00000299518 UBXN4Q92575 508 aa12.52□□□□□ -0.4
IDH3A-201ENST00000299518 P2RX7Q99572 595 aaKnown RBP12.52□□□□□ -0.4
IDH3A-201ENST00000299518 PODXL2Q9NZ53 605 aa12.52□□□□□ -0.4
IDH3A-201ENST00000299518 DDX41Q9UJV9 622 aaKnown RBP12.52□□□□□ -0.4
IDH3A-201ENST00000299518 SPATA31A6Q5VVP1 1343 aa12.52□□□□□ -0.41
IDH3A-201ENST00000299518 RASSF10A6NK89 507 aa12.52□□□□□ -0.41
IDH3A-201ENST00000299518 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
IDH3A-201ENST00000299518 PLEKP08567 350 aaPredicted RBP12.52□□□□□ -0.41
IDH3A-201ENST00000299518 CCDC175P0C221 793 aa12.52□□□□□ -0.41
IDH3A-201ENST00000299518 STAT3P40763 770 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms