RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 RC3H1Q5TC82 1133 aaKnown RBP11.36□□□□□ -0.59
COPB1-201ENST00000249923 KIAA0895Q8NCT3 520 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 RASSF8Q8NHQ8 419 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 CCSER1Q9C0I3 900 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 RAB21Q9UL25 225 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 TRIM66O15016 1216 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 RGL2O15211 777 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 NDUFA10O95299 355 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 CAPN2P17655 700 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 PPP4CP60510 307 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 FILIP1LQ4L180 1135 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 ANKRD40Q6AI12 368 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 TMTC1Q8IUR5 882 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 MSANTD4Q8NCY6 345 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 TRIM9Q9C026 710 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 TMEM260Q9NX78 707 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 CCDC194A0A1B0GVG4 234 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 KLRF2D3W0D1 207 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 ENC1O14682 589 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 KIF5CO60282 957 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 RHBDL3P58872 404 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 VSNL1P62760 191 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 GPSM2P81274 684 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 CYP26C1Q6V0L0 522 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 TPTE2Q6XPS3 522 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 CLEC10AQ8IUN9 316 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 LACRTQ9GZZ8 138 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 ANKIB1Q9P2G1 1089 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 DUSP10Q9Y6W6 482 aa11.35□□□□□ -0.59
COPB1-201ENST00000249923 ZNF263O14978 683 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 EPHB6O15197 1021 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 N4BP1O75113 896 aaKnown RBP11.34□□□□□ -0.59
COPB1-201ENST00000249923 IPO4Q8TEX9 1081 aaKnown RBP11.34□□□□□ -0.59
COPB1-201ENST00000249923 MKNK2Q9HBH9 465 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 ARFGAP3Q9NP61 516 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 TTF2Q9UNY4 1162 aaKnown RBP11.34□□□□□ -0.59
COPB1-201ENST00000249923 THSD7AQ9UPZ6 1657 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 SRCAPQ6ZRS2 3230 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 H7C1D1 291 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 CDK8P49336 464 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 DNA2P51530 1060 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 SMC1AQ14683 1233 aaKnown RBP11.34□□□□□ -0.59
COPB1-201ENST00000249923 DNAJC21Q5F1R6 531 aaKnown RBP11.34□□□□□ -0.59
COPB1-201ENST00000249923 POTEDQ86YR6 584 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 GLIS3Q8NEA6 775 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 CEP95Q96GE4 821 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 CCDC151A5D8V7 595 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 SRGAP2O75044 1071 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 ZPR1O75312 459 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 SLURP2P0DP57 97 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 BTDP43251 543 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 GRAPQ13588 217 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 MEA1Q16626 185 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 C16orf86Q6ZW13 317 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 GRAPLQ8TC17 118 aaPredicted RBP11.34□□□□□ -0.59
COPB1-201ENST00000249923 RMND1Q9NWS8 449 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 CAPN11Q9UMQ6 739 aa11.34□□□□□ -0.59
COPB1-201ENST00000249923 EPN1Q9Y6I3 576 aaPredicted RBP11.34□□□□□ -0.59
COPB1-201ENST00000249923 CTAGE9A4FU28 777 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 CCNT1O60563 726 aaKnown RBP11.33□□□□□ -0.6
COPB1-201ENST00000249923 ATP1A1P05023 1023 aaKnown RBP11.33□□□□□ -0.6
COPB1-201ENST00000249923 PLEKP08567 350 aaPredicted RBP11.33□□□□□ -0.6
COPB1-201ENST00000249923 NOVP48745 357 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 LETM2Q2VYF4 491 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 PIGSQ96S52 555 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 NUDT12Q9BQG2 462 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 ABCB6Q9NP58 842 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 USP17L5A8MUK1 530 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 SLC37A4O43826 429 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 TPM1P09493 284 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 SRGNP10124 158 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 PRPHP41219 470 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 SPAG1Q07617 926 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 TRAPPC11Q7Z392 1133 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 SPZ1Q9BXG8 430 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 UBA5Q9GZZ9 404 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 LRRC4BQ9NT99 713 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 BLOC1S4Q9NUP1 217 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 CCNL1Q9UK58 526 aaPredicted RBP11.33□□□□□ -0.6
COPB1-201ENST00000249923 A0A1W2PQC6 194 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 TECP42680 631 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 ZSCAN26Q16670 478 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
COPB1-201ENST00000249923 WDR66Q8TBY9 1149 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 GJA10Q969M2 543 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 EYA3Q99504 573 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 NAPGQ99747 312 aaPredicted RBP11.33□□□□□ -0.6
COPB1-201ENST00000249923 THAP9Q9H5L6 903 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 GUCA1BQ9UMX6 200 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 L1RE1Q9UN81 338 aa11.33□□□□□ -0.6
COPB1-201ENST00000249923 ATP8B1O43520 1251 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 EEF1GP26641 437 aaKnown RBP11.32□□□□□ -0.6
COPB1-201ENST00000249923 UBA7P41226 1012 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 JAKMIP3Q5VZ66 844 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 CABP7Q86V35 215 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 TRIM47Q96LD4 638 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 PYM1Q9BRP8 204 aaKnown RBP11.32□□□□□ -0.6
COPB1-201ENST00000249923 TUBGCP2Q9BSJ2 902 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 ARFGEF1Q9Y6D6 1849 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms