RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Dnph1Q80VJ3 173 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Bbs9Q811G0 885 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ift74Q8BKE9 600 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Nop9Q8BMC4 636 aaKnown RBP17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Gpcpd1Q8C0L9 675 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Dnajc19Q9CQV7 116 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ppp1r3gQ9CW07 347 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Krt34Q9D646 392 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Tmem191cQ9JJB1 302 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ifi207E9Q3L4 978 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Mx1P09922 631 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Rad23aP54726 363 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Eme2Q56A04 373 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Fnbp4Q6ZQ03 1031 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Cyp4f39Q8BGU0 532 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 SpidrQ8BGX7 933 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ccdc12Q8R344 166 aaKnown RBP17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Tube1Q9D6T1 475 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Armc3A2AU72 881 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Copb2O55029 905 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Tpp1O89023 562 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Lrrfip1Q3UZ39 729 aaKnown RBP17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Fkbp3Q62446 224 aaKnown RBP17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Maats1Q8BRC6 783 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Sertad1Q9JL10 236 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Plcb1Q9Z1B3 1216 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Bpifb4A2BGH0 617 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Mcm6P97311 821 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Spag5Q7TME2 1165 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Mettl5Q8K1A0 209 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Efhd1Q9D4J1 240 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 GsdmeQ9Z2D3 512 aa17.43■□□□□ 0.38
Vcan-201ENSMUST00000109543 Krt18P05784 423 aa17.42■□□□□ 0.38
Vcan-201ENSMUST00000109543 Msh3P13705 1091 aa17.42■□□□□ 0.38
Vcan-201ENSMUST00000109543 Abcd1P48410 736 aa17.42■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ccdc14Q8K2J4 934 aa17.42■□□□□ 0.38
Vcan-201ENSMUST00000109543 Tada3Q8R0L9 432 aa17.42■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ddx41Q91VN6 622 aaKnown RBP17.42■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ercc4Q9QZD4 917 aa17.42■□□□□ 0.38
Vcan-201ENSMUST00000109543 WaplQ65Z40 1200 aaKnown RBP17.42■□□□□ 0.38
Vcan-201ENSMUST00000109543 Znf532Q6NXK2 1036 aa17.42■□□□□ 0.38
Vcan-201ENSMUST00000109543 Fxr2Q9WVR4 673 aaKnown RBP17.42■□□□□ 0.38
Vcan-201ENSMUST00000109543 Lbhd1A0A087WPA0 259 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ncoa7Q6DFV7 943 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Trak2Q6P9N8 913 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 PigsQ6PD26 555 aaKnown RBP17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Camsap3Q80VC9 1252 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Phldb2Q8K1N2 1249 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Atxn7Q8R4I1 867 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Syce1Q9D495 329 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ccnt1Q9QWV9 724 aaKnown RBP17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Sorbs3Q9R1Z8 733 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Zkscan5Q9Z1D8 819 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Nrxn2E9Q7X7 1710 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Map7d1A2AJI0 846 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Scgb2b19J3QM75 112 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 AaasP58742 546 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Acot10Q32MW3 439 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Jade2Q6ZQF7 829 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Tmc4Q7TQ65 694 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Cep95Q8BVV7 827 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Spice1Q8C804 860 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Tor1aip1Q921T2 595 aaKnown RBP17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Cul5Q9D5V5 780 aa17.41■□□□□ 0.38
Vcan-201ENSMUST00000109543 Arhgap4B1AUY3 965 aa17.4■□□□□ 0.38
Vcan-201ENSMUST00000109543 Gm10378F6XQQ1 160 aa17.4■□□□□ 0.38
Vcan-201ENSMUST00000109543 H2afxP27661 143 aaKnown RBP17.4■□□□□ 0.38
Vcan-201ENSMUST00000109543 Chp1P61022 195 aa17.4■□□□□ 0.38
Vcan-201ENSMUST00000109543 Islr2Q5RKR3 745 aa17.4■□□□□ 0.38
Vcan-201ENSMUST00000109543 Large2Q5XPT3 690 aa17.4■□□□□ 0.38
Vcan-201ENSMUST00000109543 Krt79Q8VED5 531 aa17.4■□□□□ 0.38
Vcan-201ENSMUST00000109543 Apopt1Q9CQW7 192 aa17.4■□□□□ 0.38
Vcan-201ENSMUST00000109543 4930548H24RikQ9D496 437 aa17.4■□□□□ 0.38
Vcan-201ENSMUST00000109543 Fam217aQ9D9W6 419 aa17.4■□□□□ 0.38
Vcan-201ENSMUST00000109543 Lmod3E9QA62 571 aa17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 Dnm2P39054 870 aaKnown RBP17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 Man1a2P39098 641 aa17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 Slc9a2Q3ZAS0 814 aa17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 Hspa4Q61316 841 aa17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ccdc189Q6NZQ0 333 aa17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 Drc7Q6V3W6 876 aa17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 Iqcb1Q8BP00 598 aa17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 Lmbrd1Q8K0B2 537 aa17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 Gtf3c5Q8R2T8 520 aa17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ces1Q8VCC2 565 aa17.39■□□□□ 0.38
Vcan-201ENSMUST00000109543 PfasQ5SUR0 1337 aa17.39■□□□□ 0.37
Vcan-201ENSMUST00000109543 IkbkbO88351 757 aa17.39■□□□□ 0.37
Vcan-201ENSMUST00000109543 Spata18Q0P557 537 aa17.39■□□□□ 0.37
Vcan-201ENSMUST00000109543 Epn1Q80VP1 575 aa17.39■□□□□ 0.37
Vcan-201ENSMUST00000109543 HyiQ8R1F5 277 aa17.39■□□□□ 0.37
Vcan-201ENSMUST00000109543 Rhobtb3Q9CTN4 611 aa17.39■□□□□ 0.37
Vcan-201ENSMUST00000109543 Saal1Q9D2C2 474 aa17.39■□□□□ 0.37
Vcan-201ENSMUST00000109543 Sned1Q70E20 1403 aa17.39■□□□□ 0.37
Vcan-201ENSMUST00000109543 Flvcr1B2RXV4 560 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Gcom1E9PZ54 550 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Actn3O88990 900 aaKnown RBP17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Prl2c3P04768 224 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Nf2P46662 596 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 MyzapQ3UIJ9 466 aa17.38■□□□□ 0.37
Vcan-201ENSMUST00000109543 Pla2g4eQ50L42 875 aa17.38■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 205.1 ms