RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Ces2gE9PV38 560 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 FkbplO35450 347 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Zw10O54692 779 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Hoxc11P31313 304 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Lrrn4P59383 733 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 ZyxQ62523 564 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Cspg5Q71M36 566 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Pcsk9Q80W65 694 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Sertm1Q8CD78 107 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Slc4a8Q8JZR6 1089 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Hoxc12Q8K5B8 280 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Thoc1Q8R3N6 657 aaKnown RBP10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Recql5Q8VID5 982 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Supt16hQ920B9 1047 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Krt82Q99M74 516 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 HnrnpmQ9D0E1 729 aaKnown RBP10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ap2b1Q9DBG3 937 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Pmfbp1Q9WVQ0 1022 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Skint11A7XV14 364 aa10.2□□□□□ -0.78
Upf3b-201ENSMUST00000076265 KitP05532 979 aa10.2□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Nedd4lQ8CFI0 1004 aa10.2□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Bag4Q8CI61 457 aa10.2□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Cchcr1Q8K2I2 770 aa10.2□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Znf687Q9D2D7 1237 aa10.2□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Strn3Q9ERG2 796 aa10.2□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Mapk9Q9WTU6 423 aa10.2□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Nfil3O08750 462 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Actn3O88990 900 aaKnown RBP10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 MycP01108 439 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 SgcdP82347 289 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Fam178bQ24JP3 464 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Znhit6Q3UFB2 460 aaKnown RBP10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Gucy2cQ3UWA6 1072 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Esyt3Q5DTI8 891 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Znf496Q5SXI5 585 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Hsd3b5Q61694 373 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Man1c1Q6NXK9 625 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Carns1Q6ZPS2 827 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Kctd13Q8BGV7 329 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Tmem11Q8BK08 190 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Zmynd10Q99ML0 440 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ccer1Q9CQL2 403 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 NarfQ9CYQ7 462 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Fsip1Q9D3V5 435 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Pde3aQ9Z0X4 1141 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 HephQ9Z0Z4 1157 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 TnksQ6PFX9 1320 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Fam166bA2AIP0 273 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 MybP06876 636 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Stim2P83093 746 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ptgs2Q05769 604 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Slc7a1Q09143 622 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 A1bgQ19LI2 512 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Trim58Q5NCC9 485 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Nlrp4eQ66X19 978 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Alkbh2Q6P6J4 239 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Fbxo30Q8BJL1 746 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Psapl1Q8C1C1 522 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 ImmtQ8CAQ8 757 aaKnown RBP10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Npffr2Q924H0 417 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Pcsk1nQ9QXV0 258 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Arap3Q8R5G7 1538 aa10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Myom1Q62234 1667 aaKnown RBP10.19□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ninj1O70131 152 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Grem1O70326 184 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Stat4P42228 749 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ccdc154Q6RUT8 657 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Cyp2c54Q6XVG2 490 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Efr3bQ6ZQ18 817 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Rxfp4Q7TQP4 414 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Fnip2Q80TD3 1108 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 WhrnQ80VW5 918 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Gnl3Q8CI11 538 aaKnown RBP10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ncam2O35136 837 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Mpp1P70290 466 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Pou2f2Q00196 463 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 PcQ05920 1178 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Trim27Q62158 513 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ctdspl2Q8BG15 465 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Psd4Q8BLR5 1005 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Gtf3c4Q8BMQ2 817 aaKnown RBP10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Gimap5Q8BWF2 308 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Pex5lQ8C437 567 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 4921504E06RikQ8CET2 560 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Tcp11l2Q8K1H7 517 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Olfr820Q8VFU5 312 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Nkiras2Q9CR56 191 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Tmem192Q9CXT7 266 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Cep72Q9D3R3 646 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Akr1e2Q9DCT1 301 aa10.18□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Mroh9G5E8L9 891 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Gjd2O54851 321 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Lin54Q571G4 749 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Sik1Q60670 779 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ints2Q80UK8 1198 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Bpifb3Q80ZU7 473 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Morc4Q8BMD7 928 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 DlatQ8BMF4 642 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Psip1Q99JF8 528 aaKnown RBP10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Rad18Q9QXK2 509 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 104.5 ms