RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Atp13a3Q5XF89 1219 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Ddx19aQ61655 478 aaKnown RBP12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Grm4Q68EF4 912 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Clca4aQ6Q473 924 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Galnt17Q7TT15 598 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Tbc1d5Q80XQ2 815 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Gprasp2Q8BUY8 826 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Rtn1Q8K0T0 780 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Fez1Q8K0X8 392 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Alg3Q8K2A8 438 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Nr3c2Q8VII8 978 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Ankrd54Q91WK7 299 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Ier5lQ99J55 406 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Arhgef25Q9CWR0 618 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Sapcd2Q9D818 391 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Eif4enif1Q9EST3 983 aaKnown RBP12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Myh7bA2AQP0 1941 aa12.58□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Elmsan1E9Q2I4 1089 aaKnown RBP12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Flot1O08917 428 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Mx1P09922 631 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Art2aP17981 287 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 PtpreP49446 699 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 FanccP50652 591 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Lilrb3P97484 841 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 NfiaQ02780 532 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Armc2Q3URY6 854 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Cdkl5Q3UTQ8 938 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Mdh1bQ5F204 500 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Vmn1r209Q5NC97 312 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Myo19Q5SV80 963 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Nxf7Q80SZ6 620 aaKnown RBP12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Fbxo28Q8BIG4 368 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Armc6Q8BNU0 468 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Myo15bI7HPW8 3033 aa12.57□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Ripor3A1L3T7 938 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Dnai2A2AC93 623 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Cypt3B1AY64 174 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Nfil3O08750 462 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Ppef2O35385 757 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Hoxc6P10629 235 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Il6stQ00560 917 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Parp3Q3ULW8 533 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Lrrc15Q80X72 579 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Senp7Q8BUH8 1037 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Triml1Q8BVP1 470 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 MslnlQ8C160 685 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Morc2bQ8C5W4 1022 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 DnerQ8JZM4 737 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Bclaf1Q8K019 919 aaKnown RBP12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Ubac1Q8VDI7 409 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Atp5c1Q91VR2 298 aaKnown RBP12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Tdrd3Q91W18 743 aaKnown RBP12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Mrpl11Q9CQF0 192 aaKnown RBP12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Cep89Q9CZX2 791 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Tjp3Q9QXY1 905 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Gpaa1Q9WTK3 621 aa12.56□□□□□ -0.4
Tubb1-201ENSMUST00000016399 A0A1Y7VML8 143 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Eef2kO08796 724 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Mboat4P0C7A3 435 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Tff2Q03404 129 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Limch1Q3UH68 1057 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Smarcc2Q6PDG5 1213 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Slitrk3Q810B9 980 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Pramel7Q810Y8 479 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Sap130Q8BIH0 1057 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Ranbp6Q8BIV3 1105 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 3830417A13RikQ8BQJ2 303 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Epha10Q8BYG9 1007 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Zhx2Q8C0C0 836 aaKnown RBP12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Serpinb13Q8CDC0 389 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 SltmQ8CH25 1031 aaKnown RBP12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Kiaa1024Q8K3V7 917 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 DaglbQ91WC9 669 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Prpf3Q922U1 683 aaKnown RBP12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 4921524L21RikQ9D5T2 438 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Tmx2Q9D710 295 aaKnown RBP12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 AllcQ9JHX6 414 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Ifi202Q9R002 445 aa12.55□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Sall1Q9ER74 1322 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Il13ra2O88786 383 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Pgk2P09041 417 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Nap1l2P51860 460 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Peg10Q7TN75 958 aaKnown RBP12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Siglec10Q80ZE3 688 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 BC048507Q80ZS7 89 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Entpd3Q8BFW6 529 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Gpc2Q8BKV1 579 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Depdc1aQ8CIG0 804 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Dnajc17Q91WT4 303 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Susd3Q9D176 269 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Ubiad1Q9DC60 336 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Stk39Q9Z1W9 556 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Dock2Q8C3J5 1828 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Wdr33Q8K4P0 1330 aaKnown RBP12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Zscan20B2KFW1 1030 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Sept4P28661 478 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 GlrbP48168 496 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Sox1P53783 391 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Kifap3P70188 793 aa12.54□□□□□ -0.4
Tubb1-201ENSMUST00000016399 Rhpn1Q61085 643 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms