RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Foxn3Q499D0 457 aa18.07■□□□□ 0.48
Trim28-201ENSMUST00000005705 Kif23E9Q5G3 953 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Man1a2P39098 641 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 VmacQ8BP01 174 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Pwp2Q8BU03 919 aaKnown RBP18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Def6Q8C2K1 630 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 HdlbpQ8VDJ3 1268 aaKnown RBP18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 VillQ91YD6 859 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Golph3Q9CRA5 298 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Prl2c2P04095 224 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Q9D5Q8 446 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Ighmbp2P40694 993 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Ccdc114Q3UX62 658 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Cct6bQ61390 531 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Krit1Q6S5J6 736 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 BC048507Q80ZS7 89 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Ccdc122Q8BVN0 290 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Ears2Q9CXJ1 523 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Plcb1Q9Z1B3 1216 aa18.06■□□□□ 0.48
Trim28-201ENSMUST00000005705 Lama4P97927 1816 aa18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 Znf638Q61464 1960 aaKnown RBP18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 Scgb2b19J3QM75 112 aa18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 ByslO54825 436 aaKnown RBP18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 GpiP06745 558 aaKnown RBP18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 Parp1P11103 1013 aaKnown RBP18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 Msl1Q6PDM1 616 aa18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 Sdad1Q80UZ2 687 aaKnown RBP18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 Spata4Q8K3V1 295 aa18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 Ces1Q8VCC2 565 aa18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 Trub2Q91WG3 331 aaKnown RBP18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 Actn4P57780 912 aaKnown RBP18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 Q8K2W9 541 aa18.05■□□□□ 0.48
Trim28-201ENSMUST00000005705 EvplQ9D952 2035 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Myh3P13541 1940 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Adgra3Q7TT36 1310 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Akap2O54931 893 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Antxr2Q6DFX2 487 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Gm5934D3Z4U6 212 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Fam107bQ3TGF2 131 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 ItgadQ3V0T4 1168 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Kif1bpQ6ZPU9 617 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Sec24cG3X972 1096 aaKnown RBP18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Art2aP17981 287 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Pabpc4Q6PHQ9 660 aaKnown RBP18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Tmem63cQ8CBX0 802 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Pspc1Q8R326 523 aaKnown RBP18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Adarb2Q9JI20 745 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Tmem47Q9JJG6 181 aa18.04■□□□□ 0.48
Trim28-201ENSMUST00000005705 Gm5592Q3V0A6 857 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Znf827Q505G8 1078 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Arhgef19Q8BWA8 802 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Cabp7Q91ZM8 215 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 KynuQ9CXF0 464 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Ccdc105Q9D4K7 499 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Myh6Q02566 1938 aaKnown RBP18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Mx1P09922 631 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Tbc1d2bQ3U0J8 965 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Arid3aQ62431 601 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 March6Q6ZQ89 909 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Lrsam1Q80ZI6 727 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Zdhhc14Q8BQQ1 489 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Themis2Q91YX0 663 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 GzmnQ920S1 248 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Ccdc43Q9CR29 222 aaKnown RBP18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Fam173bQ9D1Z3 247 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 AvenQ9D9K3 342 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 Cfap44E9Q5M6 1843 aa18.03■□□□□ 0.48
Trim28-201ENSMUST00000005705 GakQ99KY4 1305 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Wee1P47810 646 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Ice2Q3UZ18 988 aaKnown RBP18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Ccdc148Q6P5U8 527 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Olfr805Q8VFI4 319 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Mad2l2Q9D752 211 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Sertad1Q9JL10 236 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Speer4f2E9Q366 295 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Samd15F6XZJ7 620 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Akr1b1P45376 316 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Rtkn2Q14B46 604 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 IgflQ6B9Z0 140 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Adck2Q6NSR3 617 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 RragaQ80X95 313 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 ToporslQ9D2F8 683 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Ipo7Q9EPL8 1038 aaKnown RBP18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 MycbpQ9EQS3 103 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Capn15Q9JLG8 1095 aa18.02■□□□□ 0.48
Trim28-201ENSMUST00000005705 Lrp5Q91VN0 1614 aa18.02■□□□□ 0.47
Trim28-201ENSMUST00000005705 Pfkfb3A7UAK5 555 aa18.02■□□□□ 0.47
Trim28-201ENSMUST00000005705 Fam186bD3Z420 943 aa18.02■□□□□ 0.47
Trim28-201ENSMUST00000005705 C2cd2E9Q3C1 696 aa18.02■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ttbk2Q3UVR3 1243 aa18.02■□□□□ 0.47
Trim28-201ENSMUST00000005705 Acbd5Q5XG73 508 aa18.02■□□□□ 0.47
Trim28-201ENSMUST00000005705 D130040H23RikQ8BII3 405 aa18.02■□□□□ 0.47
Trim28-201ENSMUST00000005705 Vps37cQ8R105 352 aa18.02■□□□□ 0.47
Trim28-201ENSMUST00000005705 HmcesQ8R1M0 353 aaKnown RBP18.02■□□□□ 0.47
Trim28-201ENSMUST00000005705 Scrn1Q9CZC8 414 aa18.02■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ulk4Q3V129 1303 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Npy5rO70342 466 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Slc12a2P55012 1205 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Kctd1Q5M956 257 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Tsr1Q5SWD9 803 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 57.2 ms