RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	NUP1	P20676	1076 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	VAN1	P23642	535 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	MEF1	P25039	761 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	MTR2	P34232	184 aa	Known RBP	2.86	□□□□□ -1.95
SKP2	YNL311C	CTF13	P35203	478 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	YBR139W	P38109	508 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	ALG3	P38179	458 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	YHR045W	P38775	560 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	ZRG8	P40021	1076 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	ELO3	P40319	345 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	RGD2	P43556	714 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	LYS5	P50113	272 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	ELP3	Q02908	557 aa	Known RBP	2.86	□□□□□ -1.95
SKP2	YNL311C	ISU1	Q03020	165 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	YOR376W	Q08900	122 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	SEY1	Q99287	776 aa		2.86	□□□□□ -1.95
SKP2	YNL311C	CMP2	P14747	604 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	GLK1	P17709	500 aa	Known RBP	2.85	□□□□□ -1.95
SKP2	YNL311C	TYR1	P20049	452 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	GSY2	P27472	705 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	STB6	P36085	766 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	EHT1	P38295	451 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	SWC5	P38326	303 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	TDA3	P38758	523 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	YDR089W	P38966	869 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	ERP2	P39704	215 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	YIL054W	P40524	105 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	MON1	P53129	644 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	HST1	P53685	503 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	CDC14	Q00684	551 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	FRA1	Q07825	749 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	NBA1	Q08229	501 aa	Known RBP	2.85	□□□□□ -1.95
SKP2	YNL311C	YPL216W	Q08964	1102 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	MDM32	Q12171	622 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	SWI5	P08153	709 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	2.85	□□□□□ -1.95	not detected
SKP2	YNL311C	SPC42	P36094	363 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	RFT1	P38206	574 aa	Predicted RBP	2.85	□□□□□ -1.95
SKP2	YNL311C	BIT2	P38346	545 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	YMR144W	P40214	342 aa	Known RBP	2.85	□□□□□ -1.95
SKP2	YNL311C	IRR1	P40541	1150 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	IME4	P41833	600 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	SEH1	P53011	349 aa	Known RBP	2.85	□□□□□ -1.95
SKP2	YNL311C	PBP1	P53297	722 aa	Known RBP	2.85	□□□□□ -1.95
SKP2	YNL311C	MKC7	P53379	596 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	2.85	□□□□□ -1.95	not detected
SKP2	YNL311C	PDR16	P53860	351 aa	Known RBP	2.85	□□□□□ -1.95
SKP2	YNL311C	ATG4	P53867	494 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	CTK1	Q03957	528 aa	Known RBP	2.85	□□□□□ -1.95
SKP2	YNL311C	TDA9	Q04545	1251 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	HDA2	Q06629	674 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	YOR012W	Q12351	137 aa		2.85	□□□□□ -1.95
SKP2	YNL311C	BI2	P03873	423 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	RPS8A	P0CX39	200 aa	Known RBP	2.84	□□□□□ -1.95
SKP2	YNL311C	RPS8B	P0CX40	200 aa	Known RBP	2.84	□□□□□ -1.95
SKP2	YNL311C	PCT1	P13259	424 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	AMD1	P15274	810 aa	Known RBP	2.84	□□□□□ -1.95
SKP2	YNL311C	ATE1	P16639	503 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	YSP3	P25036	478 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	CMK1	P27466	446 aa	Known RBP	2.84	□□□□□ -1.95
SKP2	YNL311C	RMA1	P36001	430 aa	Known RBP	2.84	□□□□□ -1.95
SKP2	YNL311C	MAL33	P38157	468 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	YHR112C	P38716	378 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	AIM18	P38884	321 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	MNL1	P38888	796 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	PLB1	P39105	664 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	LSM5	P40089	93 aa	Known RBP	2.84	□□□□□ -1.95
SKP2	YNL311C	CCT8	P47079	568 aa	Known RBP	2.84	□□□□□ -1.95
SKP2	YNL311C	YJR039W	P47107	1121 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	FRE4	P53746	719 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	EFM6	P53970	246 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	PRP38	Q00723	242 aa	Predicted RBP	2.84	□□□□□ -1.95
SKP2	YNL311C	MET14	Q02196	202 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	IZH4	Q99393	312 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	BI3	Q9ZZW7	517 aa		2.84	□□□□□ -1.95
SKP2	YNL311C	VMA4	P22203	233 aa	Known RBP	2.84	□□□□□ -1.96
SKP2	YNL311C	GYP6	P32806	458 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	SMC1	P32908	1225 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	SRP101	P32916	621 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	UBC6	P33296	250 aa	Predicted RBP	2.84	□□□□□ -1.96
SKP2	YNL311C	YKL102C	P34249	101 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	ECM2	P38241	364 aa	Known RBP	2.84	□□□□□ -1.96
SKP2	YNL311C	NNF1	P47149	201 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	SPT20	P50875	604 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	MPS1	P54199	764 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	YPL068C	Q02749	293 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	YMR210W	Q03649	449 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	YDR132C	Q03900	495 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	VTA1	Q06263	330 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	ADY3	Q07732	790 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	AAD15	Q08361	143 aa		2.84	□□□□□ -1.96
SKP2	YNL311C	CCW14	O13547	238 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	DAT1	P13483	248 aa	Known RBP	2.83	□□□□□ -1.96
SKP2	YNL311C	GFA1	P14742	717 aa	Known RBP	2.83	□□□□□ -1.96
SKP2	YNL311C	CLN1	P20437	546 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	MAK32	P23060	363 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	YCK1	P23291	538 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	PRP18	P33411	251 aa	Predicted RBP	2.83	□□□□□ -1.96
SKP2	YNL311C	YPT52	P36018	234 aa	Known RBP	2.83	□□□□□ -1.96
SKP2	YNL311C	YGP1	P38616	354 aa	Known RBP	2.83	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms