RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP40	YKR092C	YML002W	P0CF17	737 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	SEC12	P11655	471 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	GFA1	P14742	717 aa	Known RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	CKA2	P19454	339 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	PRP2	P20095	876 aa	Predicted RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	SEC14	P24280	304 aa	Known RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	RRP43	P25359	394 aa	Predicted RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	MSH1	P25846	959 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	MGM1	P32266	881 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	RME1	P32338	300 aa	Known RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	MCM10	P32354	571 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	PET309	P32522	965 aa	Predicted RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	DOA4	P32571	926 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	PPQ1	P32945	549 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	DHR2	P36009	735 aa	Predicted RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	YKL133C	P36066	463 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	MRPL7	P36519	292 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	TDP1	P38319	544 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	YMR262W	P38430	313 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	VMA22	P38784	181 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	SUR2	P38992	349 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	SAW1	P39735	261 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	NOP16	P40007	231 aa	Known RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	SCS2	P40075	244 aa	Known RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	YRB2	P40517	327 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	ULP2	P40537	1034 aa	Predicted RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	HYR1	P40581	163 aa	Known RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	THI6	P41835	540 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	NPA3	P47122	385 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	ASK10	P48361	1146 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	ASI1	P54074	624 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	DAK1	P54838	584 aa	Known RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	MET14	Q02196	202 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	EFR3	Q03653	782 aa	Known RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	CSI1	Q04368	295 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	DPB4	Q04603	196 aa	Known RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	PHO92	Q06390	306 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	ARR3	Q06598	404 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	ABP140	Q08641	628 aa	Known RBP	4.06	□□□□□ -1.76
SRP40	YKR092C	DIN7	Q12086	430 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SRP40	YKR092C	YOR019W	Q99248	730 aa		4.06	□□□□□ -1.76
SRP40	YKR092C	CET1	O13297	549 aa	Predicted RBP	4.05	□□□□□ -1.76
SRP40	YKR092C	RPS19A	P07280	144 aa	Known RBP	4.05	□□□□□ -1.76
SRP40	YKR092C	RPS19B	P07281	144 aa	Predicted RBP	4.05	□□□□□ -1.76
SRP40	YKR092C	SUI3	P09064	285 aa	Known RBP	4.05	□□□□□ -1.76
SRP40	YKR092C	PCK1	P10963	549 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	POL3	P15436	1097 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	MRPS28	P21771	286 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	DPH2	P32461	534 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	CSE1	P33307	960 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	TGL1	P34163	548 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	PXL1	P36166	706 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	SMF2	P38778	549 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	RCY1	P39531	840 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	YJL193W	P39542	402 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	LRO1	P40345	661 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	AXL1	P40851	1208 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	PMT6	P42934	759 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	BNA6	P43619	295 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	ABM1	P47146	123 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	SSN8	P47821	323 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	SNF12	P53628	566 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	YNR071C	P53757	342 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	TOF1	P53840	1238 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	GTR1	Q00582	310 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	MFM1	Q02783	413 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	KAP120	Q02932	1032 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	NGL2	Q03264	515 aa	Known RBP	4.05	□□□□□ -1.76
SRP40	YKR092C	PRP42	Q03776	544 aa	Known RBP	4.05	□□□□□ -1.76
SRP40	YKR092C	DYN3	Q04949	312 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	ATG17	Q06410	417 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	YPD1	Q07688	167 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	CUE5	Q08412	411 aa	Known RBP	4.05	□□□□□ -1.76
SRP40	YKR092C	SSP2	Q08646	371 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	YDR056C	Q12025	205 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	VIK1	Q12045	647 aa		4.05	□□□□□ -1.76
SRP40	YKR092C	LYS2	P07702	1392 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	URA3	P03962	267 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	VAS1	P07806	1104 aa	Known RBP	4.04	□□□□□ -1.76
SRP40	YKR092C	ILS1	P09436	1072 aa	Known RBP	4.04	□□□□□ -1.76
SRP40	YKR092C	VPS33	P20795	691 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	ARG1	P22768	420 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	KRE2	P27809	442 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	DBF4	P32325	704 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	YUH1	P35127	236 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	YBR242W	P38331	238 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	SSO2	P39926	295 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	BUD16	P39988	312 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	YIL161W	P40449	235 aa	Known RBP	4.04	□□□□□ -1.76
SRP40	YKR092C	AGE2	P40529	298 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	QRI1	P43123	477 aa	Known RBP	4.04	□□□□□ -1.76
SRP40	YKR092C	KAP114	P53067	1004 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	FMP30	Q02883	468 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	INA17	Q02888	182 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	MRPS17	Q03246	237 aa	Predicted RBP	4.04	□□□□□ -1.76
SRP40	YKR092C	RVB1	Q03940	463 aa	Known RBP	4.04	□□□□□ -1.76
SRP40	YKR092C	RTT103	Q05543	409 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	VAM6	Q07468	1049 aa		4.04	□□□□□ -1.76
SRP40	YKR092C	STE3	P06783	470 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms