RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C ARC35P53731 342 aaKnown RBP2.97□□□□□ -1.93
NMD2YHR077C PRP38Q00723 242 aaPredicted RBP2.97□□□□□ -1.93
NMD2YHR077C AAT1Q01802 451 aa2.97□□□□□ -1.93
NMD2YHR077C SKI8Q02793 397 aaPredicted RBP2.97□□□□□ -1.93
NMD2YHR077C PRP3Q03338 469 aaPredicted RBP2.97□□□□□ -1.93
NMD2YHR077C NUT2Q06213 157 aa2.97□□□□□ -1.93
NMD2YHR077C VAM6Q07468 1049 aa2.97□□□□□ -1.93
NMD2YHR077C YLR046CQ12253 270 aa2.97□□□□□ -1.93
NMD2YHR077C PRC1P00729 532 aa2.96□□□□□ -1.94
NMD2YHR077C ARG81P05085 880 aa2.96□□□□□ -1.94
NMD2YHR077C REV1P12689 985 aa2.96□□□□□ -1.94
NMD2YHR077C GEX1P25596 615 aa2.96□□□□□ -1.94
NMD2YHR077C RPS1AP33442 255 aaKnown RBP2.96□□□□□ -1.94
NMD2YHR077C TIF3P34167 436 aaKnown RBP2.96□□□□□ -1.94
NMD2YHR077C SKT5P34226 696 aa2.96□□□□□ -1.94
NMD2YHR077C MRP8P35719 219 aa2.96□□□□□ -1.94
NMD2YHR077C RMA1P36001 430 aaKnown RBP2.96□□□□□ -1.94
NMD2YHR077C GEX2P36173 615 aa2.96□□□□□ -1.94
NMD2YHR077C GIP1P38229 639 aa2.96□□□□□ -1.94
NMD2YHR077C TDP1P38319 544 aa2.96□□□□□ -1.94
NMD2YHR077C YHR033WP38690 423 aa2.96□□□□□ -1.94
NMD2YHR077C YHR218WP38899 603 aa2.96□□□□□ -1.94
NMD2YHR077C VPS25P47142 202 aa2.96□□□□□ -1.94
NMD2YHR077C VEL1P53058 206 aa2.96□□□□□ -1.94
NMD2YHR077C MTO1P53070 669 aa2.96□□□□□ -1.94
NMD2YHR077C NOP19P53317 196 aaPredicted RBP2.96□□□□□ -1.94
NMD2YHR077C YDR109CQ04585 715 aa2.96□□□□□ -1.94
NMD2YHR077C JIP5Q06214 492 aaPredicted RBP2.96□□□□□ -1.94
NMD2YHR077C RRP15Q06511 250 aaPredicted RBP2.96□□□□□ -1.94
NMD2YHR077C PER33Q12144 273 aa2.96□□□□□ -1.94
NMD2YHR077C NTO1Q12311 748 aa2.96□□□□□ -1.94
NMD2YHR077C PEX11Q12462 236 aa2.96□□□□□ -1.94
NMD2YHR077C FRT1Q99332 602 aa2.96□□□□□ -1.94
NMD2YHR077C FUM1P08417 488 aaKnown RBP2.96□□□□□ -1.94
NMD2YHR077C IDI1P15496 288 aa2.96□□□□□ -1.94
NMD2YHR077C PPH22P23595 377 aa2.96□□□□□ -1.94
NMD2YHR077C RBK1P25332 333 aa2.96□□□□□ -1.94
NMD2YHR077C SGF29P25554 259 aa2.96□□□□□ -1.94
NMD2YHR077C POL4P25615 582 aa2.96□□□□□ -1.94
NMD2YHR077C PEP12P32854 288 aa2.96□□□□□ -1.94
NMD2YHR077C RPT5P33297 434 aaKnown RBP2.96□□□□□ -1.94
NMD2YHR077C PEX5P35056 612 aa2.96□□□□□ -1.94
NMD2YHR077C CYC2P38909 366 aa2.96□□□□□ -1.94
NMD2YHR077C SPO19Q03029 223 aa2.96□□□□□ -1.94
NMD2YHR077C RAD34Q06665 692 aa2.96□□□□□ -1.94
NMD2YHR077C LDB18Q07887 179 aa2.96□□□□□ -1.94
NMD2YHR077C YOL131WQ08270 108 aa2.96□□□□□ -1.94
NMD2YHR077C MHT1Q12525 324 aa2.96□□□□□ -1.94
NMD2YHR077C MSB1P21339 1137 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C PHO87P25360 923 aa2.95□□□□□ -1.94
NMD2YHR077C DCC1P25559 380 aa2.95□□□□□ -1.94
NMD2YHR077C CYS4P32582 507 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C MRPL17P36528 281 aa2.95□□□□□ -1.94
NMD2YHR077C GOS1P38736 223 aa2.95□□□□□ -1.94
NMD2YHR077C NUP60P39705 539 aa2.95□□□□□ -1.94
NMD2YHR077C ALG8P40351 577 aa2.95□□□□□ -1.94
NMD2YHR077C GUS1P46655 708 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
NMD2YHR077C YGL176CP46945 554 aa2.95□□□□□ -1.94
NMD2YHR077C YGL108CP53139 140 aa2.95□□□□□ -1.94
NMD2YHR077C YGR053CP53234 283 aa2.95□□□□□ -1.94
NMD2YHR077C YDR239CQ03780 787 aa2.95□□□□□ -1.94
NMD2YHR077C HPT1Q04178 221 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C RTN1Q04947 295 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C FMP42Q04991 504 aa2.95□□□□□ -1.94
NMD2YHR077C YPR097WQ06839 1073 aa2.95□□□□□ -1.94
NMD2YHR077C MUM3Q08750 479 aa2.95□□□□□ -1.94
NMD2YHR077C HUA2Q12134 243 aa2.95□□□□□ -1.94
NMD2YHR077C NSI1Q12457 570 aa2.95□□□□□ -1.94
NMD2YHR077C NHA1Q99271 985 aa2.95□□□□□ -1.94
NMD2YHR077C SAS5Q99314 248 aa2.95□□□□□ -1.94
NMD2YHR077C TPK2P06245 380 aa2.95□□□□□ -1.94
NMD2YHR077C MSS18P08593 268 aa2.95□□□□□ -1.94
NMD2YHR077C PEX1P24004 1043 aa2.95□□□□□ -1.94
NMD2YHR077C VPH2P32341 215 aa2.95□□□□□ -1.94
NMD2YHR077C ADD66P36040 267 aa2.95□□□□□ -1.94
NMD2YHR077C AHP1P38013 176 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C RIB1P38066 345 aa2.95□□□□□ -1.94
NMD2YHR077C YHL041WP38730 149 aa2.95□□□□□ -1.94
NMD2YHR077C RIX1P38883 763 aaPredicted RBP2.95□□□□□ -1.94
NMD2YHR077C SWD1P39706 426 aa2.95□□□□□ -1.94
NMD2YHR077C MTW1P39731 289 aa2.95□□□□□ -1.94
NMD2YHR077C EXO1P39875 702 aa2.95□□□□□ -1.94
NMD2YHR077C RSP5P39940 809 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C PDS1P40316 373 aaPredicted RBP2.95□□□□□ -1.94
NMD2YHR077C MPM1P40364 252 aa2.95□□□□□ -1.94
NMD2YHR077C CCT7P42943 550 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C RSC8P43609 557 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C PRP24P49960 444 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C YPT32P51996 222 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C SPC105P53148 917 aa2.95□□□□□ -1.94
NMD2YHR077C SHY1P53266 389 aa2.95□□□□□ -1.94
NMD2YHR077C VAC7P53950 1165 aa2.95□□□□□ -1.94
NMD2YHR077C EMI2Q04409 500 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C NSL1Q12143 216 aa2.95□□□□□ -1.94
NMD2YHR077C WTM1Q12363 437 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C AHA1Q12449 350 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C LEU4P06208 619 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C DST1P07273 309 aa2.95□□□□□ -1.94
NMD2YHR077C SCH9P11792 824 aaKnown RBP2.95□□□□□ -1.94
NMD2YHR077C MRP13P12686 339 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms