RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W BUD22Q04347 519 aaKnown RBP6.84□□□□□ -1.31
LCP5YER127W NMD4Q12129 218 aa6.84□□□□□ -1.31
LCP5YER127W OLE1P21147 510 aaKnown RBP6.83□□□□□ -1.32
LCP5YER127W CNA1P23287 553 aa6.83□□□□□ -1.32
LCP5YER127W PTP1P25044 335 aa6.83□□□□□ -1.32
LCP5YER127W LCB1P25045 558 aaKnown RBP6.83□□□□□ -1.32
LCP5YER127W YKL050CP35736 922 aa6.83□□□□□ -1.32
LCP5YER127W MNN2P38069 597 aa6.83□□□□□ -1.32
LCP5YER127W YBR225WP38321 900 aa6.83□□□□□ -1.32
LCP5YER127W UIP3P39547 235 aa6.83□□□□□ -1.32
LCP5YER127W APL4Q12028 832 aa6.83□□□□□ -1.32
LCP5YER127W RTP1Q12751 981 aa6.83□□□□□ -1.32
LCP5YER127W MRP7P12687 371 aa6.82□□□□□ -1.32
LCP5YER127W MDM10P18409 493 aa6.82□□□□□ -1.32
LCP5YER127W ESL1P40456 1118 aa6.82□□□□□ -1.32
LCP5YER127W YIL024CP40543 189 aa6.82□□□□□ -1.32
LCP5YER127W DOT5P40553 215 aa6.82□□□□□ -1.32
LCP5YER127W PSA1P41940 361 aaKnown RBP6.82□□□□□ -1.32
LCP5YER127W IRC8P47046 822 aa6.82□□□□□ -1.32
LCP5YER127W MRX6P48564 524 aa6.82□□□□□ -1.32
LCP5YER127W GLO1P50107 326 aa6.82□□□□□ -1.32
LCP5YER127W STR3P53101 465 aaKnown RBP6.82□□□□□ -1.32
LCP5YER127W SWF1Q04629 336 aa6.82□□□□□ -1.32
LCP5YER127W SDH5Q08230 162 aa6.82□□□□□ -1.32
LCP5YER127W CTI6Q08923 506 aa6.82□□□□□ -1.32
LCP5YER127W RCN2Q12044 265 aa6.82□□□□□ -1.32
LCP5YER127W SPE4Q12455 300 aa6.82□□□□□ -1.32
LCP5YER127W PSK1P31374 1356 aa6.82□□□□□ -1.32
LCP5YER127W GCN4P03069 281 aa6.81□□□□□ -1.32
LCP5YER127W ARD1P07347 238 aaPredicted RBP6.81□□□□□ -1.32
LCP5YER127W STE50P25344 346 aa6.81□□□□□ -1.32
LCP5YER127W ADH7P25377 361 aa6.81□□□□□ -1.32
LCP5YER127W SNU114P36048 1008 aaKnown RBP6.81□□□□□ -1.32
LCP5YER127W SCO2P38072 301 aa6.81□□□□□ -1.32
LCP5YER127W VPS41P38959 992 aa6.81□□□□□ -1.32
LCP5YER127W YTP1P53584 459 aa6.81□□□□□ -1.32
LCP5YER127W RPT6Q01939 405 aaKnown RBP6.81□□□□□ -1.32
LCP5YER127W MFB1Q04922 465 aa6.81□□□□□ -1.32
LCP5YER127W CIR2Q08822 631 aa6.81□□□□□ -1.32
LCP5YER127W SLM3Q12093 417 aa6.81□□□□□ -1.32
LCP5YER127W TAH18Q12181 623 aa6.81□□□□□ -1.32
LCP5YER127W ADE6P38972 1358 aaKnown RBP6.81□□□□□ -1.32
LCP5YER127W YIH1P25637 258 aa6.8□□□□□ -1.32
LCP5YER127W LTP1P40347 161 aa6.8□□□□□ -1.32
LCP5YER127W CFD1P40558 293 aa6.8□□□□□ -1.32
LCP5YER127W ARE2P53629 642 aaKnown RBP6.8□□□□□ -1.32
LCP5YER127W ASI1P54074 624 aa6.8□□□□□ -1.32
LCP5YER127W TIM10P87108 93 aa6.8□□□□□ -1.32
LCP5YER127W YMR178WQ03219 274 aaKnown RBP6.8□□□□□ -1.32
LCP5YER127W TDA9Q04545 1251 aa6.8□□□□□ -1.32
LCP5YER127W RSF2P46974 1380 aa6.8□□□□□ -1.32
LCP5YER127W JNM1P36224 373 aa6.79□□□□□ -1.32
LCP5YER127W NPR2P39923 615 aa6.79□□□□□ -1.32
LCP5YER127W VPS25P47142 202 aa6.79□□□□□ -1.32
LCP5YER127W LEU9Q12166 604 aaKnown RBP6.79□□□□□ -1.32
LCP5YER127W REG2P38232 338 aa6.78□□□□□ -1.32
LCP5YER127W ELO1P39540 310 aa6.78□□□□□ -1.32
LCP5YER127W VRG4P40107 337 aa6.78□□□□□ -1.32
LCP5YER127W NET1P47035 1189 aa6.78□□□□□ -1.32
LCP5YER127W BNA3P47039 444 aaKnown RBP6.78□□□□□ -1.32
LCP5YER127W YPT11P48559 417 aa6.78□□□□□ -1.32
LCP5YER127W VPS75P53853 264 aa6.78□□□□□ -1.32
LCP5YER127W DPB4Q04603 196 aaKnown RBP6.78□□□□□ -1.32
LCP5YER127W LUC7Q07508 261 aaPredicted RBP6.78□□□□□ -1.32
LCP5YER127W YEH1Q07804 573 aa6.78□□□□□ -1.32
LCP5YER127W SPT7P35177 1332 aa6.77□□□□□ -1.32
LCP5YER127W CBS1P14066 229 aa6.77□□□□□ -1.33
LCP5YER127W RFC1P38630 861 aaKnown RBP6.77□□□□□ -1.33
LCP5YER127W ANS1P38832 159 aa6.77□□□□□ -1.33
LCP5YER127W NOC2P39744 710 aaKnown RBP6.77□□□□□ -1.33
LCP5YER127W RGI2P40188 164 aa6.77□□□□□ -1.33
LCP5YER127W PTR3P43606 678 aa6.77□□□□□ -1.33
LCP5YER127W EAF7P53911 425 aaKnown RBP6.77□□□□□ -1.33
LCP5YER127W EMI2Q04409 500 aaKnown RBP6.77□□□□□ -1.33
LCP5YER127W MF(ALPHA)1P01149 165 aa6.76□□□□□ -1.33
LCP5YER127W KRS1P15180 591 aaKnown RBP6.76□□□□□ -1.33
LCP5YER127W EST1P17214 699 aaPredicted RBP6.76□□□□□ -1.33
LCP5YER127W UBP11P36026 717 aa6.76□□□□□ -1.33
LCP5YER127W RMD8P43620 662 aa6.76□□□□□ -1.33
LCP5YER127W STP1Q00947 519 aa6.76□□□□□ -1.33
LCP5YER127W YPL272CQ08984 517 aa6.76□□□□□ -1.33
LCP5YER127W CDC31P06704 161 aaKnown RBP6.75□□□□□ -1.33
LCP5YER127W KGD1P20967 1014 aaKnown RBP6.75□□□□□ -1.33
LCP5YER127W CLB2P24869 491 aa6.75□□□□□ -1.33
LCP5YER127W STV1P37296 890 aa6.75□□□□□ -1.33
LCP5YER127W MAF1P41910 395 aa6.75□□□□□ -1.33
LCP5YER127W MRPL19P53875 158 aa6.75□□□□□ -1.33
LCP5YER127W EFM6P53970 246 aa6.75□□□□□ -1.33
LCP5YER127W POS5Q06892 414 aa6.75□□□□□ -1.33
LCP5YER127W GRC3Q07845 632 aa6.75□□□□□ -1.33
LCP5YER127W TEN1Q07921 160 aa6.75□□□□□ -1.33
LCP5YER127W YPT6Q99260 215 aa6.75□□□□□ -1.33
LCP5YER127W ARG3P05150 338 aa6.74□□□□□ -1.33
LCP5YER127W RPB8P20436 146 aa6.74□□□□□ -1.33
LCP5YER127W DBP8P38719 431 aa6.74□□□□□ -1.33
LCP5YER127W TOM71P38825 639 aaKnown RBP6.74□□□□□ -1.33
LCP5YER127W ARF3P40994 183 aaRIP-Chip data6.74□□□□□ -1.33not detected
LCP5YER127W SGM1P47166 707 aa6.74□□□□□ -1.33
LCP5YER127W SGF73P53165 657 aa6.74□□□□□ -1.33
LCP5YER127W VTC3Q02725 835 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms