RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W CMK1P27466 446 aaKnown RBP1.58□□□□□ -2.16
LCD1YDR499W SNC1P31109 117 aa1.58□□□□□ -2.16
LCD1YDR499W IFA38P38286 347 aa1.58□□□□□ -2.16
LCD1YDR499W PSD1P39006 500 aa1.58□□□□□ -2.16
LCD1YDR499W SEC24P40482 926 aaKnown RBP1.58□□□□□ -2.16
LCD1YDR499W IST3P40565 148 aaPredicted RBP1.58□□□□□ -2.16
LCD1YDR499W YGL242CP53066 181 aa1.58□□□□□ -2.16
LCD1YDR499W WSC2P53832 503 aa1.58□□□□□ -2.16
LCD1YDR499W EMI2Q04409 500 aaKnown RBP1.58□□□□□ -2.16
LCD1YDR499W BLS1Q06071 122 aa1.58□□□□□ -2.16
LCD1YDR499W TFC6Q06339 672 aa1.58□□□□□ -2.16
LCD1YDR499W THI20Q08224 551 aa1.58□□□□□ -2.16
LCD1YDR499W RAD16P31244 790 aa1.58□□□□□ -2.16
LCD1YDR499W MRS6P32864 603 aaKnown RBP1.58□□□□□ -2.16
LCD1YDR499W VPS52P39904 641 aa1.58□□□□□ -2.16
LCD1YDR499W PRE5P40302 234 aaKnown RBP1.58□□□□□ -2.16
LCD1YDR499W YTA12P40341 825 aa1.58□□□□□ -2.16
LCD1YDR499W RPS10BP46784 105 aaKnown RBP1.58□□□□□ -2.16
LCD1YDR499W YGR021WP53212 290 aa1.58□□□□□ -2.16
LCD1YDR499W MRPL13Q02204 264 aa1.58□□□□□ -2.16
LCD1YDR499W YPL014WQ02606 381 aa1.58□□□□□ -2.16
LCD1YDR499W SPE2P21182 396 aa1.57□□□□□ -2.16
LCD1YDR499W UBC1P21734 215 aaKnown RBP1.57□□□□□ -2.16
LCD1YDR499W XRS2P33301 854 aa1.57□□□□□ -2.16
LCD1YDR499W SMK1P41808 388 aa1.57□□□□□ -2.16
LCD1YDR499W IME4P41833 600 aa1.57□□□□□ -2.16
LCD1YDR499W IDP2P41939 412 aa1.57□□□□□ -2.16
LCD1YDR499W YMR160WQ03823 816 aa1.57□□□□□ -2.16
LCD1YDR499W VMS1Q04311 632 aaKnown RBP1.57□□□□□ -2.16
LCD1YDR499W RPS10AQ08745 105 aaPredicted RBP1.57□□□□□ -2.16
LCD1YDR499W YCL021W-AQ96VH3 125 aa1.57□□□□□ -2.16
LCD1YDR499W YEL045CP32616 141 aa1.56□□□□□ -2.16
LCD1YDR499W SNU114P36048 1008 aaKnown RBP1.56□□□□□ -2.16
LCD1YDR499W PSY4P38193 441 aa1.56□□□□□ -2.16
LCD1YDR499W LAG1P38703 411 aa1.56□□□□□ -2.16
LCD1YDR499W MTC6P38849 526 aa1.56□□□□□ -2.16
LCD1YDR499W BUR6P40096 142 aa1.56□□□□□ -2.16
LCD1YDR499W BNA1P47096 177 aa1.56□□□□□ -2.16
LCD1YDR499W YVH1Q02256 364 aaKnown RBP1.56□□□□□ -2.16
LCD1YDR499W PSK2Q08217 1101 aa1.56□□□□□ -2.16
LCD1YDR499W YBR085C-AO43137 85 aa1.56□□□□□ -2.16
LCD1YDR499W ARG81P05085 880 aa1.56□□□□□ -2.16
LCD1YDR499W DBP8P38719 431 aa1.56□□□□□ -2.16
LCD1YDR499W NPR2P39923 615 aa1.56□□□□□ -2.16
LCD1YDR499W RRT6P53117 311 aaPredicted RBP1.56□□□□□ -2.16
LCD1YDR499W SMM1P53720 384 aaKnown RBP1.56□□□□□ -2.16
LCD1YDR499W GTR1Q00582 310 aa1.56□□□□□ -2.16
LCD1YDR499W RLI1Q03195 608 aaKnown RBP1.56□□□□□ -2.16
LCD1YDR499W ECM30Q06673 1274 aa1.56□□□□□ -2.16
LCD1YDR499W TRM8Q12009 286 aa1.56□□□□□ -2.16
LCD1YDR499W SSM4P40318 1319 aa1.55□□□□□ -2.16
LCD1YDR499W SNF1P06782 633 aaKnown RBP1.55□□□□□ -2.16
LCD1YDR499W PUT2P07275 575 aa1.55□□□□□ -2.16
LCD1YDR499W TRX2P22803 104 aaKnown RBP1.55□□□□□ -2.16
LCD1YDR499W YCR022CP25620 114 aa1.55□□□□□ -2.16
LCD1YDR499W TUL1P36096 758 aa1.55□□□□□ -2.16
LCD1YDR499W RPS7BP48164 190 aaKnown RBP1.55□□□□□ -2.16
LCD1YDR499W PYK2P52489 506 aaKnown RBP1.55□□□□□ -2.16
LCD1YDR499W ZDS2P54786 942 aa1.55□□□□□ -2.16
LCD1YDR499W RSM23Q01163 450 aa1.55□□□□□ -2.16
LCD1YDR499W GLO2Q05584 274 aa1.55□□□□□ -2.16
LCD1YDR499W YLR302CO13544 120 aa1.55□□□□□ -2.16
LCD1YDR499W CAR1P00812 333 aaKnown RBP1.55□□□□□ -2.16
LCD1YDR499W RER1P25560 188 aa1.55□□□□□ -2.16
LCD1YDR499W PMU1P36069 295 aa1.55□□□□□ -2.16
LCD1YDR499W TSC10P38342 320 aa1.55□□□□□ -2.16
LCD1YDR499W PTH1P38876 190 aaKnown RBP1.55□□□□□ -2.16
LCD1YDR499W UIP3P39547 235 aa1.55□□□□□ -2.16
LCD1YDR499W YML131WQ03102 365 aa1.55□□□□□ -2.16
LCD1YDR499W VID22Q05934 901 aa1.55□□□□□ -2.16
LCD1YDR499W APE1P14904 514 aa1.54□□□□□ -2.16
LCD1YDR499W SGV1P23293 657 aaKnown RBP1.54□□□□□ -2.16
LCD1YDR499W DPB3P27344 201 aa1.54□□□□□ -2.16
LCD1YDR499W TEF4P36008 412 aaKnown RBP1.54□□□□□ -2.16
LCD1YDR499W YER010CP40011 234 aa1.54□□□□□ -2.16
LCD1YDR499W DUG3P53871 357 aa1.54□□□□□ -2.16
LCD1YDR499W INN1P53901 409 aa1.54□□□□□ -2.16
LCD1YDR499W PAL1Q05518 499 aaKnown RBP1.54□□□□□ -2.16
LCD1YDR499W TMC1Q08422 150 aaPredicted RBP1.54□□□□□ -2.16
LCD1YDR499W SSP2Q08646 371 aa1.54□□□□□ -2.16
LCD1YDR499W NUS1Q12063 375 aa1.54□□□□□ -2.16
LCD1YDR499W PFK2P16862 959 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
LCD1YDR499W LSB5P25369 354 aa1.54□□□□□ -2.16
LCD1YDR499W CBF2P32504 956 aa1.54□□□□□ -2.16
LCD1YDR499W SAC6P32599 642 aaKnown RBP1.54□□□□□ -2.16
LCD1YDR499W KTR3P38130 404 aaPredicted RBP1.54□□□□□ -2.16
LCD1YDR499W DIA4P38705 446 aaPredicted RBP1.54□□□□□ -2.16
LCD1YDR499W OSH3P38713 996 aaKnown RBP1.54□□□□□ -2.16
LCD1YDR499W UME6P39001 836 aa1.54□□□□□ -2.16
LCD1YDR499W ELO1P39540 310 aa1.54□□□□□ -2.16
LCD1YDR499W KAP123P40069 1113 aaKnown RBP1.54□□□□□ -2.16
LCD1YDR499W RIC1P40395 1056 aa1.54□□□□□ -2.16
LCD1YDR499W SGM1P47166 707 aa1.54□□□□□ -2.16
LCD1YDR499W APJ1P53940 528 aa1.54□□□□□ -2.16
LCD1YDR499W YOR387CQ08910 206 aa1.54□□□□□ -2.16
LCD1YDR499W RPB2P08518 1224 aaKnown RBP1.53□□□□□ -2.16
LCD1YDR499W PMR1P13586 950 aa1.53□□□□□ -2.16
LCD1YDR499W FUN19P28003 413 aaPredicted RBP1.53□□□□□ -2.16
LCD1YDR499W CNS1P33313 385 aa1.53□□□□□ -2.16
LCD1YDR499W SLC1P33333 303 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms