RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W APM4Q99186 491 aa3.42□□□□□ -1.86
NUP60YAR002W RGS2Q99188 309 aa3.42□□□□□ -1.86
NUP60YAR002W SOD2P00447 233 aa3.41□□□□□ -1.86
NUP60YAR002W HIS1P00498 297 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W SPE1P08432 466 aa3.41□□□□□ -1.86
NUP60YAR002W REC107P21651 314 aa3.41□□□□□ -1.86
NUP60YAR002W AMD2P22580 549 aa3.41□□□□□ -1.86
NUP60YAR002W PHA2P32452 334 aa3.41□□□□□ -1.86
NUP60YAR002W PAH1P32567 862 aa3.41□□□□□ -1.86
NUP60YAR002W DSS4P32601 143 aa3.41□□□□□ -1.86
NUP60YAR002W BEM3P32873 1128 aa3.41□□□□□ -1.86
NUP60YAR002W TYE7P33122 291 aaPredicted RBP3.41□□□□□ -1.86
NUP60YAR002W TSA1P34760 196 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W RRN3P36070 627 aa3.41□□□□□ -1.86
NUP60YAR002W SPC42P36094 363 aa3.41□□□□□ -1.86
NUP60YAR002W HMT1P38074 348 aa3.41□□□□□ -1.86
NUP60YAR002W YBR056WP38081 501 aa3.41□□□□□ -1.86
NUP60YAR002W FUI1P38196 639 aa3.41□□□□□ -1.86
NUP60YAR002W SLX1P38324 304 aa3.41□□□□□ -1.86
NUP60YAR002W YHR202WP38887 602 aa3.41□□□□□ -1.86
NUP60YAR002W DSS1P39112 969 aa3.41□□□□□ -1.86
NUP60YAR002W EDC3P39998 551 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W ALG5P40350 334 aa3.41□□□□□ -1.86
NUP60YAR002W MET12P46151 657 aa3.41□□□□□ -1.86
NUP60YAR002W USE1P53146 245 aa3.41□□□□□ -1.86
NUP60YAR002W GTF1P53260 183 aaPredicted RBP3.41□□□□□ -1.86
NUP60YAR002W BUD32P53323 261 aa3.41□□□□□ -1.86
NUP60YAR002W DUS1P53759 423 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W IST1P53843 298 aaPredicted RBP3.41□□□□□ -1.86
NUP60YAR002W YNL144CP53907 740 aa3.41□□□□□ -1.86
NUP60YAR002W MTD1Q02046 320 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W MET14Q02196 202 aa3.41□□□□□ -1.86
NUP60YAR002W YKR011CQ02209 353 aa3.41□□□□□ -1.86
NUP60YAR002W RLI1Q03195 608 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W ENT5Q03769 411 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W YDR132CQ03900 495 aa3.41□□□□□ -1.86
NUP60YAR002W SLD7Q08457 257 aa3.41□□□□□ -1.86
NUP60YAR002W HRT3Q12347 344 aa3.41□□□□□ -1.86
NUP60YAR002W YMR030W-AQ3E760 96 aa3.41□□□□□ -1.86
NUP60YAR002W RPS13P05756 151 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W ERG20P08524 352 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W APE1P14904 514 aa3.41□□□□□ -1.86
NUP60YAR002W HSP26P15992 214 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
NUP60YAR002W KGD2P19262 463 aaPredicted RBP3.41□□□□□ -1.86
NUP60YAR002W ATP12P22135 325 aa3.41□□□□□ -1.86
NUP60YAR002W SPS22P25380 463 aa3.41□□□□□ -1.86
NUP60YAR002W ADY2P25613 283 aa3.41□□□□□ -1.86
NUP60YAR002W RAD14P28519 371 aa3.41□□□□□ -1.86
NUP60YAR002W VPH1P32563 840 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W GDA1P32621 518 aa3.41□□□□□ -1.86
NUP60YAR002W MRS6P32864 603 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W SIP2P34164 415 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W SWH1P35845 1188 aa3.41□□□□□ -1.86
NUP60YAR002W CUE2P36075 443 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W CTP1P38152 299 aa3.41□□□□□ -1.86
NUP60YAR002W SIF2P38262 535 aa3.41□□□□□ -1.86
NUP60YAR002W TSC10P38342 320 aa3.41□□□□□ -1.86
NUP60YAR002W SRP68P38687 599 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W YHI9P38765 294 aa3.41□□□□□ -1.86
NUP60YAR002W FRT2P39734 528 aa3.41□□□□□ -1.86
NUP60YAR002W ROK1P45818 564 aaPredicted RBP3.41□□□□□ -1.86
NUP60YAR002W SNG1P46950 547 aa3.41□□□□□ -1.86
NUP60YAR002W MIG2P53035 382 aa3.41□□□□□ -1.86
NUP60YAR002W TEL2P53038 688 aa3.41□□□□□ -1.86
NUP60YAR002W GND2P53319 492 aa3.41□□□□□ -1.86
NUP60YAR002W COP1P53622 1201 aaKnown RBP3.41□□□□□ -1.86
NUP60YAR002W HOT1Q03213 719 aa3.41□□□□□ -1.86
NUP60YAR002W INP2Q03824 705 aa3.41□□□□□ -1.86
NUP60YAR002W NHX1Q04121 633 aa3.41□□□□□ -1.86
NUP60YAR002W ECM22Q05958 814 aaPredicted RBP3.41□□□□□ -1.86
NUP60YAR002W CDA2Q06703 312 aa3.41□□□□□ -1.86
NUP60YAR002W SWC7Q06707 132 aa3.41□□□□□ -1.86
NUP60YAR002W LEA1Q08963 238 aaPredicted RBP3.41□□□□□ -1.86
NUP60YAR002W RRP36Q12481 300 aaPredicted RBP3.41□□□□□ -1.86
NUP60YAR002W AFI1Q99222 893 aa3.41□□□□□ -1.86
NUP60YAR002W YPR089WO13585 888 aa3.4□□□□□ -1.87
NUP60YAR002W COX5AP00424 153 aa3.4□□□□□ -1.87
NUP60YAR002W RHO2P06781 192 aa3.4□□□□□ -1.87
NUP60YAR002W HIS5P07172 385 aa3.4□□□□□ -1.87
NUP60YAR002W ATP1P07251 545 aaKnown RBP3.4□□□□□ -1.87
NUP60YAR002W ADK2P26364 225 aa3.4□□□□□ -1.87
NUP60YAR002W SIN4P32259 974 aa3.4□□□□□ -1.87
NUP60YAR002W SFP1P32432 683 aa3.4□□□□□ -1.87
NUP60YAR002W SPR1P32603 445 aa3.4□□□□□ -1.87
NUP60YAR002W NUP120P35729 1037 aa3.4□□□□□ -1.87
NUP60YAR002W KAP104P38217 918 aaKnown RBP3.4□□□□□ -1.87
NUP60YAR002W AIM3P38266 947 aaKnown RBP3.4□□□□□ -1.87
NUP60YAR002W ATG12P38316 186 aa3.4□□□□□ -1.87
NUP60YAR002W YHR182WP38870 785 aa3.4□□□□□ -1.87
NUP60YAR002W RIO2P40160 425 aaKnown RBP3.4□□□□□ -1.87
NUP60YAR002W ELO3P40319 345 aa3.4□□□□□ -1.87
NUP60YAR002W JEM1P40358 645 aa3.4□□□□□ -1.87
NUP60YAR002W HOS4P40480 1083 aa3.4□□□□□ -1.87
NUP60YAR002W YIL108WP40483 696 aaKnown RBP3.4□□□□□ -1.87
NUP60YAR002W SEC28P40509 296 aaKnown RBP3.4□□□□□ -1.87
NUP60YAR002W RLP7P40693 322 aaKnown RBP3.4□□□□□ -1.87
NUP60YAR002W RTT101P47050 842 aa3.4□□□□□ -1.87
NUP60YAR002W VPS25P47142 202 aa3.4□□□□□ -1.87
NUP60YAR002W YJR142WP47173 342 aa3.4□□□□□ -1.87
NUP60YAR002W TRF5P48561 642 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms