RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 RNF180Q86T96 592 aa23.75■■□□□ 1.39
CLN6-222ENST00000637667 LENG1Q96BZ8 264 aaPredicted RBP23.75■■□□□ 1.39
CLN6-222ENST00000637667 FGD4Q96M96 766 aa23.75■■□□□ 1.39
CLN6-222ENST00000637667 TOMM22Q9NS69 142 aa23.75■■□□□ 1.39
CLN6-222ENST00000637667 ZHX1Q9UKY1 873 aaPredicted RBP23.75■■□□□ 1.39
CLN6-222ENST00000637667 ZMYM6O95789 1325 aa23.75■■□□□ 1.39
CLN6-222ENST00000637667 CCDC171Q6TFL3 1326 aa23.75■■□□□ 1.39
CLN6-222ENST00000637667 PLXNA1Q9UIW2 1896 aa23.75■■□□□ 1.39
CLN6-222ENST00000637667 NUCB1Q02818 461 aa23.74■■□□□ 1.39
CLN6-222ENST00000637667 TRIM60Q495X7 471 aa23.74■■□□□ 1.39
CLN6-222ENST00000637667 PLEKHM2Q8IWE5 1019 aa23.74■■□□□ 1.39
CLN6-222ENST00000637667 AGBL1Q96MI9 1066 aa23.74■■□□□ 1.39
CLN6-222ENST00000637667 ACAD9Q9H845 621 aa23.74■■□□□ 1.39
CLN6-222ENST00000637667 FAM184BQ9ULE4 1060 aa23.74■■□□□ 1.39
CLN6-222ENST00000637667 ZNF536O15090 1300 aa23.74■■□□□ 1.39
CLN6-222ENST00000637667 RRP12Q5JTH9 1297 aaKnown RBP23.73■■□□□ 1.39
CLN6-222ENST00000637667 C1orf53Q5VUE5 145 aa23.73■■□□□ 1.39
CLN6-222ENST00000637667 RASGRP2Q7LDG7 609 aa23.73■■□□□ 1.39
CLN6-222ENST00000637667 OSBPL3Q9H4L5 887 aa23.73■■□□□ 1.39
CLN6-222ENST00000637667 RNF146Q9NTX7 359 aa23.73■■□□□ 1.39
CLN6-222ENST00000637667 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.73■■□□□ 1.39
CLN6-222ENST00000637667 MTMR7Q9Y216 660 aa23.73■■□□□ 1.39
CLN6-222ENST00000637667 ADAMTS4O75173 837 aa23.72■■□□□ 1.39
CLN6-222ENST00000637667 SDSP20132 328 aa23.72■■□□□ 1.39
CLN6-222ENST00000637667 HAND2P61296 217 aa23.72■■□□□ 1.39
CLN6-222ENST00000637667 TKFCQ3LXA3 575 aa23.72■■□□□ 1.39
CLN6-222ENST00000637667 DCAF4Q8WV16 495 aa23.72■■□□□ 1.39
CLN6-222ENST00000637667 PRR12Q9ULL5 1215 aa23.72■■□□□ 1.39
CLN6-222ENST00000637667 POTEB2H3BUK9 544 aa23.71■■□□□ 1.39
CLN6-222ENST00000637667 MFAP1P55081 439 aaKnown RBP23.71■■□□□ 1.39
CLN6-222ENST00000637667 ACVR2BQ13705 512 aa23.71■■□□□ 1.39
CLN6-222ENST00000637667 CCDC96Q2M329 555 aa23.71■■□□□ 1.39
CLN6-222ENST00000637667 GPR153Q6NV75 609 aa23.71■■□□□ 1.39
CLN6-222ENST00000637667 CCDC174Q6PII3 467 aa23.71■■□□□ 1.39
CLN6-222ENST00000637667 ARMCX2Q7L311 632 aa23.71■■□□□ 1.39
CLN6-222ENST00000637667 ABHD16BQ9H3Z7 469 aa23.71■■□□□ 1.39
CLN6-222ENST00000637667 A1CFQ9NQ94 594 aaKnown RBP23.71■■□□□ 1.39
CLN6-222ENST00000637667 PRDM5Q9NQX1 630 aaPredicted RBP23.71■■□□□ 1.39
CLN6-222ENST00000637667 TCP11L1Q9NUJ3 509 aa23.71■■□□□ 1.39
CLN6-222ENST00000637667 SYNRGQ9UMZ2 1314 aa23.7■■□□□ 1.38
CLN6-222ENST00000637667 TOP1P11387 765 aaKnown RBP23.7■■□□□ 1.38
CLN6-222ENST00000637667 ALAS1P13196 640 aa23.7■■□□□ 1.38
CLN6-222ENST00000637667 SNAP25P60880 206 aa23.7■■□□□ 1.38
CLN6-222ENST00000637667 CNTN2Q02246 1040 aa23.7■■□□□ 1.38
CLN6-222ENST00000637667 TLE2Q04725 743 aa23.7■■□□□ 1.38
CLN6-222ENST00000637667 FAM133AQ8N9E0 248 aa23.7■■□□□ 1.38
CLN6-222ENST00000637667 TRERF1Q96PN7 1200 aa23.7■■□□□ 1.38
CLN6-222ENST00000637667 TSEN34Q9BSV6 310 aaKnown RBP23.7■■□□□ 1.38
CLN6-222ENST00000637667 PDLIM7Q9NR12 457 aa23.7■■□□□ 1.38
CLN6-222ENST00000637667 A0A1W2PQ45 241 aaPredicted RBP23.69■■□□□ 1.38
CLN6-222ENST00000637667 A0A1W2PQY0 241 aa23.69■■□□□ 1.38
CLN6-222ENST00000637667 DUSP11O75319 330 aaKnown RBP23.69■■□□□ 1.38
CLN6-222ENST00000637667 PCP11498 1178 aaKnown RBP23.69■■□□□ 1.38
CLN6-222ENST00000637667 AKNAD1Q5T1N1 836 aa23.69■■□□□ 1.38
CLN6-222ENST00000637667 CCDC144CPQ8IYA2 1237 aa23.69■■□□□ 1.38
CLN6-222ENST00000637667 KLHDC9Q8NEP7 349 aa23.69■■□□□ 1.38
CLN6-222ENST00000637667 TMEM47Q9BQJ4 181 aa23.69■■□□□ 1.38
CLN6-222ENST00000637667 CCDC144BQ3MJ40 725 aa23.68■■□□□ 1.38
CLN6-222ENST00000637667 TTBK2Q6IQ55 1244 aa23.68■■□□□ 1.38
CLN6-222ENST00000637667 MFSD6Q6ZSS7 791 aa23.68■■□□□ 1.38
CLN6-222ENST00000637667 TBC1D10CQ8IV04 446 aa23.68■■□□□ 1.38
CLN6-222ENST00000637667 ACLYP53396 1101 aa23.67■■□□□ 1.38
CLN6-222ENST00000637667 BTNL9Q6UXG8 535 aa23.67■■□□□ 1.38
CLN6-222ENST00000637667 SH3RF1Q7Z6J0 888 aa23.67■■□□□ 1.38
CLN6-222ENST00000637667 KATNBL1Q9H079 304 aa23.67■■□□□ 1.38
CLN6-222ENST00000637667 DIAPH3Q9NSV4 1193 aa23.67■■□□□ 1.38
CLN6-222ENST00000637667 CCPG1Q9ULG6 757 aa23.67■■□□□ 1.38
CLN6-222ENST00000637667 TRIM43BA6NCK2 446 aa23.66■■□□□ 1.38
CLN6-222ENST00000637667 SOWAHBA6NEL2 793 aa23.66■■□□□ 1.38
CLN6-222ENST00000637667 MOXD2PA6NHM9 499 aa23.66■■□□□ 1.38
CLN6-222ENST00000637667 ADCY6O43306 1168 aa23.66■■□□□ 1.38
CLN6-222ENST00000637667 SLC16A2P36021 539 aa23.66■■□□□ 1.38
CLN6-222ENST00000637667 MUM1L1Q5H9M0 696 aa23.66■■□□□ 1.38
CLN6-222ENST00000637667 SYDE2Q5VT97 1194 aa23.66■■□□□ 1.38
CLN6-222ENST00000637667 CWC27Q6UX04 472 aaKnown RBP23.66■■□□□ 1.38
CLN6-222ENST00000637667 TRIM43Q96BQ3 446 aaPredicted RBP23.66■■□□□ 1.38
CLN6-222ENST00000637667 RANBP17Q9H2T7 1088 aaKnown RBP23.66■■□□□ 1.38
CLN6-222ENST00000637667 RNF41Q9H4P4 317 aaPredicted RBP23.66■■□□□ 1.38
CLN6-222ENST00000637667 FRMPD2Q68DX3 1309 aaPredicted RBP23.65■■□□□ 1.38
CLN6-222ENST00000637667 MYADML2A6NDP7 307 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 ASB14A6NK59 587 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 ICAM1P05362 532 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 CST5P28325 142 aaPredicted RBP23.65■■□□□ 1.38
CLN6-222ENST00000637667 KCNA10Q16322 511 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 CCSAPQ6IQ19 270 aaPredicted RBP23.65■■□□□ 1.38
CLN6-222ENST00000637667 DEFB123Q8N688 67 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 NUP133Q8WUM0 1156 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 BADQ92934 168 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 TTC14Q96N46 770 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 UPF3AQ9H1J1 476 aaKnown RBP23.65■■□□□ 1.38
CLN6-222ENST00000637667 SPC25Q9HBM1 224 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 GPCPD1Q9NPB8 672 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 STARD7Q9NQZ5 370 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 CYP39A1Q9NYL5 469 aa23.65■■□□□ 1.38
CLN6-222ENST00000637667 MCM3APO60318 1980 aa23.64■■□□□ 1.38
CLN6-222ENST00000637667 HIP1O00291 1037 aa23.64■■□□□ 1.37
CLN6-222ENST00000637667 PQBP1O60828 265 aaKnown RBP23.64■■□□□ 1.37
CLN6-222ENST00000637667 CLTBP09497 229 aa23.64■■□□□ 1.37
CLN6-222ENST00000637667 C6orf222P0C671 652 aaPredicted RBP23.64■■□□□ 1.37
CLN6-222ENST00000637667 PDHBP11177 359 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms