RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 KCNB2Q92953 911 aa16.34■□□□□ 0.21
SNRPA1-216ENST00000626000 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-216ENST00000626000 GPCPD1Q9NPB8 672 aa16.34■□□□□ 0.21
SNRPA1-216ENST00000626000 PFASO15067 1338 aa16.34■□□□□ 0.21
SNRPA1-216ENST00000626000 CCDC69A6NI79 296 aa16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 PEX10O60683 326 aa16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 GNAQP50148 359 aa16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 SYNE3Q6ZMZ3 975 aa16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 DHX32Q7L7V1 743 aaKnown RBP16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 CTCFLQ8NI51 663 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 IGDCC4Q8TDY8 1250 aa16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 DDX11Q96FC9 970 aa16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 LZTS2Q9BRK4 669 aa16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 NRBP1Q9UHY1 535 aa16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 CCPG1Q9ULG6 757 aa16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 FRMPD2Q68DX3 1309 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-216ENST00000626000 GJB1P08034 283 aa16.32■□□□□ 0.2
SNRPA1-216ENST00000626000 ELNP15502 786 aa16.32■□□□□ 0.2
SNRPA1-216ENST00000626000 SMARCA1P28370 1054 aa16.32■□□□□ 0.2
SNRPA1-216ENST00000626000 GRM4Q14833 912 aa16.32■□□□□ 0.2
SNRPA1-216ENST00000626000 NFXL1Q6ZNB6 911 aa16.32■□□□□ 0.2
SNRPA1-216ENST00000626000 ZNF467Q7Z7K2 595 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-216ENST00000626000 RPTORQ8N122 1335 aa16.32■□□□□ 0.2
SNRPA1-216ENST00000626000 HMX1Q9NP08 348 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-216ENST00000626000 RNF146Q9NTX7 359 aa16.32■□□□□ 0.2
SNRPA1-216ENST00000626000 TAF6LQ9Y6J9 622 aa16.32■□□□□ 0.2
SNRPA1-216ENST00000626000 KLRF2D3W0D1 207 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 SH2B2O14492 632 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 DHX16O60231 1041 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 MSCO60682 206 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 CCL5P13501 91 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 RGS19P49795 217 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 RCAN1P53805 252 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 ANTXR2P58335 489 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 TROAPQ12815 778 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 TTBK2Q6IQ55 1244 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 SGMS1Q86VZ5 419 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 ANKRD35Q8N283 1001 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 TRIB2Q92519 343 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 RNF208Q9H0X6 261 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 SLC12A7Q9Y666 1083 aa16.31■□□□□ 0.2
SNRPA1-216ENST00000626000 ZNF536O15090 1300 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 LOC102724159A0A0B4J2E5 919 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 PALM3A6NDB9 673 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 ALAS1P13196 640 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 SLC16A2P36021 539 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 FGD1P98174 961 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 PPP2R5BQ15173 497 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 PWP2Q15269 919 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 MAP3K21Q5TCX8 1036 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 CCDC174Q6PII3 467 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 BLOC1S2Q6QNY1 142 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 ZNF654Q8IZM8 581 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 TRERF1Q96PN7 1200 aa16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 MPHOSPH6Q99547 160 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-216ENST00000626000 ZNFX1Q9P2E3 1918 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 ABCB11O95342 1321 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 DNAJC25-GNG10A0A024R161 153 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 GOLGA8HP0CJ92 632 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 PRKAR2AP13861 404 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 GJA8P48165 433 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 MLLT1Q03111 559 aaPredicted RBP16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 CHST3Q7LGC8 479 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 ADGRF4Q8IZF3 695 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 MAML3Q96JK9 1138 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 AGBL1Q96MI9 1066 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 PAK6Q9NQU5 681 aaPredicted RBP16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 RIPK3Q9Y572 518 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 PLXNA1Q9UIW2 1896 aa16.29■□□□□ 0.2
SNRPA1-216ENST00000626000 SYNGAP1Q96PV0 1343 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 B4DLN1 442 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 MRPL12P52815 198 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 ANAPC15P60006 121 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 CDC37Q16543 378 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 ZNF792Q3KQV3 632 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 RASGRP2Q7LDG7 609 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 MCF2L2Q86YR7 1114 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 RASEFQ8IZ41 740 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 FBXL16Q8N461 479 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 SAMD3Q8N6K7 520 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 RGS22Q8NE09 1264 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 CHMP4CQ96CF2 233 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 JAKMIP1Q96N16 626 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 AMNQ9BXJ7 453 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 USP26Q9BXU7 913 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 TM6SF1Q9BZW5 370 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 HOMER2Q9NSB8 354 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 ADD3Q9UEY8 706 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 MAD2L2Q9UI95 211 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 SNX14Q9Y5W7 946 aa16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 KIAA0100Q14667 2235 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-216ENST00000626000 MYH6P13533 1939 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 POTEB2H3BUK9 544 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 COBLO75128 1261 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 SOX10P56693 466 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 EXOSC10Q01780 885 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 MAMDC4Q6UXC1 1216 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms