RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 NRDCO43847 1150 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 TNNT1P13805 278 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 SLC15A2Q16348 729 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 PPP4R3BQ5MIZ7 849 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 DHX36Q9H2U1 1008 aaKnown RBP31.74■■■□□ 2.67
CSPG5-205ENST00000610462 GPCPD1Q9NPB8 672 aa31.74■■■□□ 2.67
CSPG5-205ENST00000610462 REXO1Q8N1G1 1221 aaKnown RBP31.73■■■□□ 2.67
CSPG5-205ENST00000610462 IDI2Q9BXS1 227 aa31.73■■■□□ 2.67
CSPG5-205ENST00000610462 USP27XA6NNY8 438 aa31.72■■■□□ 2.67
CSPG5-205ENST00000610462 MPHOSPH10O00566 681 aaKnown RBP31.72■■■□□ 2.67
CSPG5-205ENST00000610462 KCNJ6P48051 423 aa31.72■■■□□ 2.67
CSPG5-205ENST00000610462 ORC2Q13416 577 aaPredicted RBP31.72■■■□□ 2.67
CSPG5-205ENST00000610462 LETM2Q2VYF4 491 aa31.72■■■□□ 2.67
CSPG5-205ENST00000610462 CCAR2Q8N163 923 aaKnown RBP31.72■■■□□ 2.67
CSPG5-205ENST00000610462 C7orf43Q8WVR3 580 aa31.72■■■□□ 2.67
CSPG5-205ENST00000610462 PCDHAC2Q9Y5I4 1007 aa31.72■■■□□ 2.67
CSPG5-205ENST00000610462 CCNT1O60563 726 aaKnown RBP31.72■■■□□ 2.67
CSPG5-205ENST00000610462 OR52Z1P0C646 297 aa31.72■■■□□ 2.67
CSPG5-205ENST00000610462 GTF2F1P35269 517 aaKnown RBP eCLIP31.72■■■□□ 2.67
CSPG5-205ENST00000610462 KLHL10Q6JEL2 608 aa31.72■■■□□ 2.67
CSPG5-205ENST00000610462 UBA7P41226 1012 aa31.71■■■□□ 2.67
CSPG5-205ENST00000610462 RRAGBQ5VZM2 374 aa31.71■■■□□ 2.67
CSPG5-205ENST00000610462 RMND1Q9NWS8 449 aa31.71■■■□□ 2.67
CSPG5-205ENST00000610462 BIN2Q9UBW5 565 aaPredicted RBP31.71■■■□□ 2.67
CSPG5-205ENST00000610462 PP2D1A8MPX8 630 aa31.71■■■□□ 2.67
CSPG5-205ENST00000610462 RBM5P52756 815 aaKnown RBP eCLIP31.71■■■□□ 2.67
CSPG5-205ENST00000610462 SMYD4Q8IYR2 804 aaPredicted RBP31.71■■■□□ 2.67
CSPG5-205ENST00000610462 TBCKQ8TEA7 893 aa31.71■■■□□ 2.67
CSPG5-205ENST00000610462 AK8Q96MA6 479 aa31.71■■■□□ 2.67
CSPG5-205ENST00000610462 DNAJC18Q9H819 358 aa31.71■■■□□ 2.67
CSPG5-205ENST00000610462 NPM3O75607 178 aaKnown RBP31.7■■■□□ 2.67
CSPG5-205ENST00000610462 GPATCH4Q5T3I0 446 aaKnown RBP31.7■■■□□ 2.67
CSPG5-205ENST00000610462 JAKMIP3Q5VZ66 844 aa31.7■■■□□ 2.67
CSPG5-205ENST00000610462 COA7Q96BR5 231 aa31.7■■■□□ 2.67
CSPG5-205ENST00000610462 JMJD4Q9H9V9 463 aa31.7■■■□□ 2.67
CSPG5-205ENST00000610462 FAM198AQ9UFP1 575 aa31.7■■■□□ 2.67
CSPG5-205ENST00000610462 SERPINA10Q9UK55 444 aa31.7■■■□□ 2.67
CSPG5-205ENST00000610462 ADCY7P51828 1080 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 CACNB3P54284 484 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 NAALADL2Q58DX5 795 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 PPP1R18Q6NYC8 613 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 ADGRF4Q8IZF3 695 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 PNMA6FA0A0J9YX94 578 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 RPN1P04843 607 aaKnown RBP31.69■■■□□ 2.66
CSPG5-205ENST00000610462 STX17P56962 302 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 TCP10Q12799 353 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 AOC3Q16853 763 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 CCDC112Q8NEF3 446 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 PI4KBQ9UBF8 816 aa31.69■■■□□ 2.66
CSPG5-205ENST00000610462 TBX2Q13207 712 aaPredicted RBP31.68■■■□□ 2.66
CSPG5-205ENST00000610462 CC2D2BQ6DHV5 1058 aa31.68■■■□□ 2.66
CSPG5-205ENST00000610462 NYAP1Q6ZVC0 841 aa31.68■■■□□ 2.66
CSPG5-205ENST00000610462 RASSF8Q8NHQ8 419 aa31.68■■■□□ 2.66
CSPG5-205ENST00000610462 TMEM260Q9NX78 707 aa31.68■■■□□ 2.66
CSPG5-205ENST00000610462 STK32BQ9NY57 414 aa31.68■■■□□ 2.66
CSPG5-205ENST00000610462 DDTLA6NHG4 134 aaPredicted RBP31.68■■■□□ 2.66
CSPG5-205ENST00000610462 ATP2B2Q01814 1243 aa31.68■■■□□ 2.66
CSPG5-205ENST00000610462 EZH2Q15910 746 aaKnown RBP31.68■■■□□ 2.66
CSPG5-205ENST00000610462 ZNF658Q5TYW1 1059 aaPredicted RBP31.68■■■□□ 2.66
CSPG5-205ENST00000610462 CDKAL1Q5VV42 579 aa31.68■■■□□ 2.66
CSPG5-205ENST00000610462 SLURP2P0DP57 97 aa31.67■■■□□ 2.66
CSPG5-205ENST00000610462 NR1I3Q14994 352 aa31.67■■■□□ 2.66
CSPG5-205ENST00000610462 TMX1Q9H3N1 280 aa31.67■■■□□ 2.66
CSPG5-205ENST00000610462 A0A1B0GTH6 734 aa31.66■■■□□ 2.66
CSPG5-205ENST00000610462 RIOK3O14730 519 aaKnown RBP31.66■■■□□ 2.66
CSPG5-205ENST00000610462 CCDC96Q2M329 555 aa31.66■■■□□ 2.66
CSPG5-205ENST00000610462 E4F1Q66K89 784 aaPredicted RBP31.66■■■□□ 2.66
CSPG5-205ENST00000610462 TTBK2Q6IQ55 1244 aa31.66■■■□□ 2.66
CSPG5-205ENST00000610462 SUPT20HQ8NEM7 779 aa31.66■■■□□ 2.66
CSPG5-205ENST00000610462 CAMKK2Q96RR4 588 aa31.66■■■□□ 2.66
CSPG5-205ENST00000610462 TRMT1Q9NXH9 659 aaKnown RBP31.66■■■□□ 2.66
CSPG5-205ENST00000610462 CTNND2Q9UQB3 1225 aa31.66■■■□□ 2.66
CSPG5-205ENST00000610462 PSDA5PKW4 1024 aaPredicted RBP31.66■■■□□ 2.66
CSPG5-205ENST00000610462 MYL1P05976 194 aa31.66■■■□□ 2.66
CSPG5-205ENST00000610462 PTPN14Q15678 1187 aa31.66■■■□□ 2.66
CSPG5-205ENST00000610462 PTPN21Q16825 1174 aa31.65■■■□□ 2.66
CSPG5-205ENST00000610462 CEP135Q66GS9 1140 aa31.65■■■□□ 2.66
CSPG5-205ENST00000610462 SPECC1LQ69YQ0 1117 aa31.65■■■□□ 2.66
CSPG5-205ENST00000610462 SH3BP5LQ7L8J4 393 aa31.65■■■□□ 2.66
CSPG5-205ENST00000610462 CABP7Q86V35 215 aa31.65■■■□□ 2.66
CSPG5-205ENST00000610462 CUEDC2Q9H467 287 aa31.65■■■□□ 2.66
CSPG5-205ENST00000610462 PAXBP1Q9Y5B6 917 aa31.65■■■□□ 2.66
CSPG5-205ENST00000610462 CERKLQ49MI3 558 aaPredicted RBP31.64■■■□□ 2.66
CSPG5-205ENST00000610462 APTXQ7Z2E3 356 aaKnown RBP31.64■■■□□ 2.66
CSPG5-205ENST00000610462 MKL1Q969V6 931 aa31.64■■■□□ 2.66
CSPG5-205ENST00000610462 MTMR8Q96EF0 704 aa31.64■■■□□ 2.66
CSPG5-205ENST00000610462 RIC8AQ9NPQ8 531 aa31.64■■■□□ 2.66
CSPG5-205ENST00000610462 KBTBD4Q9NVX7 518 aa31.64■■■□□ 2.66
CSPG5-205ENST00000610462 RWDD2AQ9UIY3 292 aa31.64■■■□□ 2.66
CSPG5-205ENST00000610462 ZSCAN29Q8IWY8 852 aaPredicted RBP31.64■■■□□ 2.66
CSPG5-205ENST00000610462 MAGEF1Q9HAY2 307 aa31.64■■■□□ 2.66
CSPG5-205ENST00000610462 NYAP2Q9P242 653 aa31.64■■■□□ 2.66
CSPG5-205ENST00000610462 PSME4Q14997 1843 aa31.63■■■□□ 2.65
CSPG5-205ENST00000610462 EN1Q05925 392 aaPredicted RBP31.63■■■□□ 2.65
CSPG5-205ENST00000610462 FAM196BA6NMK8 535 aa31.63■■■□□ 2.65
CSPG5-205ENST00000610462 PPP1R11O60927 126 aaPredicted RBP31.63■■■□□ 2.65
CSPG5-205ENST00000610462 TATDN1Q6P1N9 297 aa31.63■■■□□ 2.65
CSPG5-205ENST00000610462 KCTD1Q719H9 257 aa31.63■■■□□ 2.65
CSPG5-205ENST00000610462 CTAGE1Q96RT6 745 aa31.63■■■□□ 2.65
CSPG5-205ENST00000610462 KANSL2Q9H9L4 492 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms