RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TIMP1P01033 207 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 LDHBP07195 334 aaKnown RBP6.65□□□□□ -1.34
HERC1-213ENST00000561359 ACRP10323 421 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 ALADP13716 330 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 HOXA7P31268 230 aaPredicted RBP6.65□□□□□ -1.34
HERC1-213ENST00000561359 PICALMQ13492 652 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 METTL24Q5JXM2 366 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 TREML4Q6UXN2 200 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 ZNF365Q70YC5 407 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 C16orf59Q7L2K0 433 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 BANK1Q8NDB2 785 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 LINS1Q8NG48 757 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 NPLOC4Q8TAT6 608 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 OCSTAMPQ9BR26 566 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 IDI2Q9BXS1 227 aa6.65□□□□□ -1.34
HERC1-213ENST00000561359 OSBPL5Q9H0X9 879 aaPredicted RBP6.65□□□□□ -1.34
HERC1-213ENST00000561359 MTIF3Q9H2K0 278 aaKnown RBP6.65□□□□□ -1.34
HERC1-213ENST00000561359 YBX2Q9Y2T7 364 aaKnown RBP6.65□□□□□ -1.34
HERC1-213ENST00000561359 MROH5Q6ZUA9 1318 aa6.65□□□□□ -1.35
HERC1-213ENST00000561359 PTPRFP10586 1907 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 TRANK1O15050 2925 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 ZBBXA8MT70 800 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 MAN1A2O60476 641 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 HOXC6P09630 235 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 CSF2RAP15509 400 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 PRDX5P30044 214 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 BACE1P56817 501 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 GNAI1P63096 354 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 FAAP100Q0VG06 881 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 FKBP5Q13451 457 aaPredicted RBP6.64□□□□□ -1.35
HERC1-213ENST00000561359 FAM47AQ5JRC9 791 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 EPHA10Q5JZY3 1008 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 RASIP1Q5U651 963 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 MFSD5Q6N075 450 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 PSRC1Q6PGN9 363 aaPredicted RBP6.64□□□□□ -1.35
HERC1-213ENST00000561359 G2E3Q7L622 706 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 DPP9Q86TI2 863 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 GJD3Q8N144 294 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 LINC00528Q8N1L1 170 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 MEIOBQ8N635 442 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 DNAAF4Q8WXU2 420 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 PHF24Q9UPV7 400 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 PCDHB9Q9Y5E1 797 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 MTCH2Q9Y6C9 303 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 CLSPNQ9HAW4 1339 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 RLFQ13129 1914 aa6.64□□□□□ -1.35
HERC1-213ENST00000561359 A0A1W2PQ45 241 aaPredicted RBP6.63□□□□□ -1.35
HERC1-213ENST00000561359 A0A1W2PQY0 241 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 RFXAPO00287 272 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 TERTO14746 1132 aaKnown RBP6.63□□□□□ -1.35
HERC1-213ENST00000561359 IFIT1P09914 478 aaKnown RBP6.63□□□□□ -1.35
HERC1-213ENST00000561359 ZNF853P0CG23 659 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 SLC5A1P13866 664 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 MYOGP15173 224 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 CAP2P40123 477 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 RABGGTBP53611 331 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 GRB14Q14449 540 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 INTS6LQ5JSJ4 861 aaKnown RBP6.63□□□□□ -1.35
HERC1-213ENST00000561359 PRAMEF19Q5SWL8 479 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 KRT40Q6A162 431 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 ANKRD33Q7Z3H0 272 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 RNF180Q86T96 592 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 TMEM199Q8N511 208 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 TSPYL6Q8N831 410 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 RUNDC1Q96C34 613 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 ZNF521Q96K83 1311 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 TOX2Q96NM4 488 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 TSEN34Q9BSV6 310 aaKnown RBP6.63□□□□□ -1.35
HERC1-213ENST00000561359 PCGF6Q9BYE7 350 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 XPNPEP3Q9NQH7 507 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 DDX4Q9NQI0 724 aaKnown RBP6.63□□□□□ -1.35
HERC1-213ENST00000561359 IFT57Q9NWB7 429 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 PLXNA1Q9UIW2 1896 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 RABGAP1Q9Y3P9 1069 aa6.63□□□□□ -1.35
HERC1-213ENST00000561359 BRWD1Q9NSI6 2320 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 C19orf81C9J6K1 198 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 USP17L10C9JJH3 530 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 DCXO43602 365 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 PDE8BO95263 885 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 PGK1P00558 417 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 RARBP10826 455 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 CALD1Q05682 793 aaKnown RBP6.62□□□□□ -1.35
HERC1-213ENST00000561359 FLIIQ13045 1269 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 CBLBQ13191 982 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 OLFML2BQ68BL8 750 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 NUP133Q8WUM0 1156 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 WDR18Q9BV38 432 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 PPP1R12CQ9BZL4 782 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 CERS4Q9HA82 394 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 STARD7Q9NQZ5 370 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 SNRKQ9NRH2 765 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 TBX21Q9UL17 535 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 DOCK1Q14185 1865 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 FRMPD3Q5JV73 1810 aa6.62□□□□□ -1.35
HERC1-213ENST00000561359 RIF1Q5UIP0 2472 aaKnown RBP6.61□□□□□ -1.35
HERC1-213ENST00000561359 EPG5Q9HCE0 2579 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 CHD8Q9HCK8 2581 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 SOBPA7XYQ1 873 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 CNMDO75829 334 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 FGBP02675 491 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms