RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 LENG1Q96BZ8 264 aaPredicted RBP13.8□□□□□ -0.2
LDLR-212ENST00000560467 TTYH1Q9H313 450 aaPredicted RBP13.8□□□□□ -0.2
LDLR-212ENST00000560467 SEMA6BQ9H3T3 888 aa13.8□□□□□ -0.2
LDLR-212ENST00000560467 ARHGEF10LQ9HCE6 1279 aa13.8□□□□□ -0.2
LDLR-212ENST00000560467 PDRG1Q9NUG6 133 aa13.8□□□□□ -0.2
LDLR-212ENST00000560467 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
LDLR-212ENST00000560467 SLC5A4Q9NY91 659 aa13.8□□□□□ -0.2
LDLR-212ENST00000560467 SWAP70Q9UH65 585 aa13.8□□□□□ -0.2
LDLR-212ENST00000560467 TMX2Q9Y320 296 aa13.8□□□□□ -0.2
LDLR-212ENST00000560467 A0A0G2JMZ2 1700 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 LTBP2Q14767 1821 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 NAV1Q8NEY1 1877 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 ERICH2A1L162 156 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 E7EWF7 191 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 PGK1P00558 417 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 FCER1AP12319 257 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 TAL1P17542 331 aaPredicted RBP13.79□□□□□ -0.2
LDLR-212ENST00000560467 CTR9Q6PD62 1173 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 DHX32Q7L7V1 743 aaKnown RBP13.79□□□□□ -0.2
LDLR-212ENST00000560467 MYLIPQ8WY64 445 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 ESR2Q92731 530 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 IL17RAQ96F46 866 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 MMP19Q99542 508 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 MKNK2Q9HBH9 465 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 XPNPEP3Q9NQH7 507 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 ANAPC4Q9UJX5 808 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 PHF24Q9UPV7 400 aa13.79□□□□□ -0.2
LDLR-212ENST00000560467 WDR46O15213 610 aaKnown RBP13.78□□□□□ -0.2
LDLR-212ENST00000560467 RARBP10826 455 aa13.78□□□□□ -0.2
LDLR-212ENST00000560467 CDK8P49336 464 aa13.78□□□□□ -0.2
LDLR-212ENST00000560467 EPHB4P54760 987 aa13.78□□□□□ -0.2
LDLR-212ENST00000560467 RRP12Q5JTH9 1297 aaKnown RBP13.78□□□□□ -0.2
LDLR-212ENST00000560467 ZNF444Q8N0Y2 327 aaPredicted RBP13.78□□□□□ -0.2
LDLR-212ENST00000560467 SNX21Q969T3 373 aa13.78□□□□□ -0.2
LDLR-212ENST00000560467 IPO9Q96P70 1041 aaKnown RBP13.78□□□□□ -0.2
LDLR-212ENST00000560467 UPF3BQ9BZI7 483 aaKnown RBP13.78□□□□□ -0.2
LDLR-212ENST00000560467 SH2D4AQ9H788 454 aa13.78□□□□□ -0.2
LDLR-212ENST00000560467 CDH23Q9H251 3354 aa13.77□□□□□ -0.2
LDLR-212ENST00000560467 PQBP1O60828 265 aaKnown RBP13.77□□□□□ -0.21
LDLR-212ENST00000560467 SLC25A27O95847 323 aa13.77□□□□□ -0.21
LDLR-212ENST00000560467 EEF2P13639 858 aaKnown RBP13.77□□□□□ -0.21
LDLR-212ENST00000560467 RPS6KB1P23443 525 aa13.77□□□□□ -0.21
LDLR-212ENST00000560467 SMAD3P84022 425 aaKnown RBP13.77□□□□□ -0.21
LDLR-212ENST00000560467 CCDC178Q5BJE1 867 aa13.77□□□□□ -0.21
LDLR-212ENST00000560467 C12orf60Q5U649 245 aa13.77□□□□□ -0.21
LDLR-212ENST00000560467 C1orf53Q5VUE5 145 aa13.77□□□□□ -0.21
LDLR-212ENST00000560467 STAG1Q8WVM7 1258 aa13.77□□□□□ -0.21
LDLR-212ENST00000560467 RNPC3Q96LT9 517 aaKnown RBP13.77□□□□□ -0.21
LDLR-212ENST00000560467 ZSCAN31Q96LW9 406 aaPredicted RBP13.77□□□□□ -0.21
LDLR-212ENST00000560467 UBAC1Q9BSL1 405 aa13.77□□□□□ -0.21
LDLR-212ENST00000560467 EPB41L4AQ9HCS5 686 aaPredicted RBP13.77□□□□□ -0.21
LDLR-212ENST00000560467 NRBP1Q9UHY1 535 aa13.77□□□□□ -0.21
LDLR-212ENST00000560467 ADAMTS5Q9UNA0 930 aa13.77□□□□□ -0.21
LDLR-212ENST00000560467 SPTBN5Q9NRC6 3674 aaKnown RBP13.77□□□□□ -0.21
LDLR-212ENST00000560467 EYSQ5T1H1 3165 aa13.77□□□□□ -0.21
LDLR-212ENST00000560467 RLFQ13129 1914 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 VWA5AO00534 786 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 RAD21O60216 631 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 CLTBP09497 229 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 CTDSPL2Q05D32 466 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 ZNF792Q3KQV3 632 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 FAM83BQ5T0W9 1011 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 C16orf86Q6ZW13 317 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 IQCA1Q86XH1 822 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 RIOX2Q8IUF8 465 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 TMTC2Q8N394 836 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 CCDC17Q96LX7 622 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 KIF2CQ99661 725 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 TINF2Q9BSI4 451 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 PPP1R9AQ9ULJ8 1098 aa13.76□□□□□ -0.21
LDLR-212ENST00000560467 ROBO3Q96MS0 1386 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 WDR19Q8NEZ3 1342 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 A0A1W2PQ45 241 aaPredicted RBP13.75□□□□□ -0.21
LDLR-212ENST00000560467 A0A1W2PQY0 241 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 FOXP2O15409 715 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 RANBP6O60518 1105 aaKnown RBP13.75□□□□□ -0.21
LDLR-212ENST00000560467 ZNF865P0CJ78 1059 aaPredicted RBP13.75□□□□□ -0.21
LDLR-212ENST00000560467 FOSL2P15408 326 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 STAT3P40763 770 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 KCTD2Q14681 263 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 ADCK5Q3MIX3 580 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 PPP4R3BQ5MIZ7 849 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 RNF180Q86T96 592 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 REPS2Q8NFH8 660 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 NUP88Q99567 741 aaPredicted RBP13.75□□□□□ -0.21
LDLR-212ENST00000560467 MTA3Q9BTC8 594 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 ZNF214Q9UL59 606 aaPredicted RBP13.75□□□□□ -0.21
LDLR-212ENST00000560467 LIMCH1Q9UPQ0 1083 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 TACC3Q9Y6A5 838 aa13.75□□□□□ -0.21
LDLR-212ENST00000560467 PRUNE2Q8WUY3 3088 aa13.74□□□□□ -0.21
LDLR-212ENST00000560467 K7ELQ4 463 aaPredicted RBP13.74□□□□□ -0.21
LDLR-212ENST00000560467 KIAA0355O15063 1070 aa13.74□□□□□ -0.21
LDLR-212ENST00000560467 PRC1O43663 620 aa13.74□□□□□ -0.21
LDLR-212ENST00000560467 ADAMTS4O75173 837 aa13.74□□□□□ -0.21
LDLR-212ENST00000560467 AKR1A1P14550 325 aa13.74□□□□□ -0.21
LDLR-212ENST00000560467 NFXL1Q6ZNB6 911 aa13.74□□□□□ -0.21
LDLR-212ENST00000560467 STK11IPQ8N1F8 1099 aa13.74□□□□□ -0.21
LDLR-212ENST00000560467 TMEM87BQ96K49 555 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms