RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 CHST13Q8NET6 341 aa17.4■□□□□ 0.38
RPL28-208ENST00000559463 ZSCAN10Q96SZ4 725 aaPredicted RBP17.4■□□□□ 0.38
RPL28-208ENST00000559463 KRT23Q9C075 422 aa17.4■□□□□ 0.38
RPL28-208ENST00000559463 CNNM2Q9H8M5 875 aa17.4■□□□□ 0.38
RPL28-208ENST00000559463 HOMER2Q9NSB8 354 aa17.4■□□□□ 0.38
RPL28-208ENST00000559463 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
RPL28-208ENST00000559463 TAF6LQ9Y6J9 622 aa17.4■□□□□ 0.38
RPL28-208ENST00000559463 SYDE2Q5VT97 1194 aa17.39■□□□□ 0.37
RPL28-208ENST00000559463 NECAB2Q7Z6G3 386 aa17.39■□□□□ 0.37
RPL28-208ENST00000559463 ANKS1AQ92625 1134 aa17.39■□□□□ 0.37
RPL28-208ENST00000559463 FGD4Q96M96 766 aa17.39■□□□□ 0.37
RPL28-208ENST00000559463 TINF2Q9BSI4 451 aa17.39■□□□□ 0.37
RPL28-208ENST00000559463 HTATIP2Q9BUP3 242 aa17.39■□□□□ 0.37
RPL28-208ENST00000559463 RANBP17Q9H2T7 1088 aaKnown RBP17.39■□□□□ 0.37
RPL28-208ENST00000559463 GPCPD1Q9NPB8 672 aa17.39■□□□□ 0.37
RPL28-208ENST00000559463 RNF146Q9NTX7 359 aa17.39■□□□□ 0.37
RPL28-208ENST00000559463 FBXO40Q9UH90 709 aa17.39■□□□□ 0.37
RPL28-208ENST00000559463 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
RPL28-208ENST00000559463 TNKSO95271 1327 aa17.39■□□□□ 0.37
RPL28-208ENST00000559463 TRIOBPQ9H2D6 2365 aa17.38■□□□□ 0.37
RPL28-208ENST00000559463 CCDC178Q5BJE1 867 aa17.38■□□□□ 0.37
RPL28-208ENST00000559463 BMP2KLQ5H9B9 411 aa17.38■□□□□ 0.37
RPL28-208ENST00000559463 CYB5R4Q7L1T6 521 aa17.38■□□□□ 0.37
RPL28-208ENST00000559463 PNMA1Q8ND90 353 aa17.38■□□□□ 0.37
RPL28-208ENST00000559463 DPF3Q92784 378 aa17.38■□□□□ 0.37
RPL28-208ENST00000559463 ACAD9Q9H845 621 aa17.38■□□□□ 0.37
RPL28-208ENST00000559463 PFASO15067 1338 aa17.38■□□□□ 0.37
RPL28-208ENST00000559463 H0YGN5 161 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 SEPT4O43236 478 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 MSCO60682 206 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 ICAM1P05362 532 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 COL6A1P12109 1028 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 ALAS1P13196 640 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 MUM1L1Q5H9M0 696 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 STOX1Q6ZVD7 989 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 ANKRD35Q8N283 1001 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 MAP4K1Q92918 833 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 DDX11Q96FC9 970 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 ESYT1Q9BSJ8 1104 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 C11orf49Q9H6J7 331 aa17.37■□□□□ 0.37
RPL28-208ENST00000559463 A1CFQ9NQ94 594 aaKnown RBP17.37■□□□□ 0.37
RPL28-208ENST00000559463 GOLGA8HP0CJ92 632 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 SEC23AQ15436 765 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 TKFCQ3LXA3 575 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 ANO1Q5XXA6 986 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 MAMDC4Q6UXC1 1216 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 CCDC136Q96JN2 1154 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 TRERF1Q96PN7 1200 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 LSG1Q9H089 658 aaKnown RBP17.36■□□□□ 0.37
RPL28-208ENST00000559463 KAT14Q9H8E8 782 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 NRBP1Q9UHY1 535 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 CCPG1Q9ULG6 757 aa17.36■□□□□ 0.37
RPL28-208ENST00000559463 RBM8AQ9Y5S9 174 aaKnown RBP17.36■□□□□ 0.37
RPL28-208ENST00000559463 LAMA3Q16787 3333 aa17.35■□□□□ 0.37
RPL28-208ENST00000559463 E7EWF7 191 aa17.35■□□□□ 0.37
RPL28-208ENST00000559463 SNAI1O95863 264 aaPredicted RBP17.35■□□□□ 0.37
RPL28-208ENST00000559463 ZNF865P0CJ78 1059 aaPredicted RBP17.35■□□□□ 0.37
RPL28-208ENST00000559463 ZNF467Q7Z7K2 595 aaPredicted RBP17.35■□□□□ 0.37
RPL28-208ENST00000559463 MSL3Q8N5Y2 521 aaKnown RBP17.35■□□□□ 0.37
RPL28-208ENST00000559463 CPVLQ9H3G5 476 aa17.35■□□□□ 0.37
RPL28-208ENST00000559463 SYNGAP1Q96PV0 1343 aa17.35■□□□□ 0.37
RPL28-208ENST00000559463 CNTN2Q02246 1040 aa17.34■□□□□ 0.37
RPL28-208ENST00000559463 GPATCH4Q5T3I0 446 aaKnown RBP17.34■□□□□ 0.37
RPL28-208ENST00000559463 FAM133AQ8N9E0 248 aa17.34■□□□□ 0.37
RPL28-208ENST00000559463 ASTN1O14525 1302 aa17.33■□□□□ 0.36
RPL28-208ENST00000559463 TRDNQ13061 729 aa17.33■□□□□ 0.36
RPL28-208ENST00000559463 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.36
RPL28-208ENST00000559463 UBA5Q9GZZ9 404 aa17.33■□□□□ 0.36
RPL28-208ENST00000559463 CYP39A1Q9NYL5 469 aa17.33■□□□□ 0.36
RPL28-208ENST00000559463 KIAA1217Q5T5P2 1943 aa17.33■□□□□ 0.36
RPL28-208ENST00000559463 SZT2Q5T011 3432 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 SOWAHBA6NEL2 793 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 DNM1LO00429 736 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 NFIBO00712 420 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 EVI5O60447 810 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 ANTXR2P58335 489 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 ASPRV1Q53RT3 343 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 GJC2Q5T442 439 aaPredicted RBP17.32■□□□□ 0.36
RPL28-208ENST00000559463 ARMCX2Q7L311 632 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 MB21D2Q8IYB1 491 aaPredicted RBP17.32■□□□□ 0.36
RPL28-208ENST00000559463 NCOA7Q8NI08 942 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 LENG1Q96BZ8 264 aaPredicted RBP17.32■□□□□ 0.36
RPL28-208ENST00000559463 SENP2Q9HC62 589 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.32■□□□□ 0.36
RPL28-208ENST00000559463 CNPY2Q9Y2B0 182 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 LTBP2Q14767 1821 aa17.32■□□□□ 0.36
RPL28-208ENST00000559463 WDR19Q8NEZ3 1342 aa17.31■□□□□ 0.36
RPL28-208ENST00000559463 POTEB2H3BUK9 544 aa17.31■□□□□ 0.36
RPL28-208ENST00000559463 PARP1P09874 1014 aaKnown RBP17.31■□□□□ 0.36
RPL28-208ENST00000559463 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
RPL28-208ENST00000559463 CHST3Q7LGC8 479 aa17.31■□□□□ 0.36
RPL28-208ENST00000559463 RALYLQ86SE5 291 aaKnown RBP17.31■□□□□ 0.36
RPL28-208ENST00000559463 CCDC144CPQ8IYA2 1237 aa17.31■□□□□ 0.36
RPL28-208ENST00000559463 CLEC4DQ8WXI8 215 aa17.31■□□□□ 0.36
RPL28-208ENST00000559463 KATNBL1Q9H079 304 aa17.31■□□□□ 0.36
RPL28-208ENST00000559463 DDX49Q9Y6V7 483 aaKnown RBP17.31■□□□□ 0.36
RPL28-208ENST00000559463 NEFLP07196 543 aa17.3■□□□□ 0.36
RPL28-208ENST00000559463 RARBP10826 455 aa17.3■□□□□ 0.36
RPL28-208ENST00000559463 AKR1A1P14550 325 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms