RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 TRIB2Q92519 343 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 ANKS1AQ92625 1134 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 JAKMIP1Q96N16 626 aaKnown RBP10.47□□□□□ -0.73
SPG11-207ENST00000558138 TRERF1Q96PN7 1200 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 UNC93B1Q9H1C4 597 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 CPVLQ9H3G5 476 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 HMX1Q9NP08 348 aaPredicted RBP10.47□□□□□ -0.73
SPG11-207ENST00000558138 GJD2Q9UKL4 321 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 SLC12A7Q9Y666 1083 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 PTPDC1A2A3K4 754 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 KLRF2D3W0D1 207 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 SH2B2O14492 632 aaPredicted RBP10.46□□□□□ -0.73
SPG11-207ENST00000558138 ATP2A1O14983 1001 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 ICAM1P05362 532 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 HMGB1P09429 215 aaKnown RBP10.46□□□□□ -0.73
SPG11-207ENST00000558138 XRCC5P13010 732 aaKnown RBP10.46□□□□□ -0.73
SPG11-207ENST00000558138 PSMA5P28066 241 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 KIF5BP33176 963 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 ANTXR2P58335 489 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 CDC37Q16543 378 aaPredicted RBP10.46□□□□□ -0.73
SPG11-207ENST00000558138 TKFCQ3LXA3 575 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 BLOC1S2Q6QNY1 142 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 HOMER1Q86YM7 354 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 RAB11FIP4Q86YS3 637 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 CCDC144CPQ8IYA2 1237 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 ZNF654Q8IZM8 581 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 ABRAQ8N0Z2 381 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 TMTC2Q8N394 836 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 NPLOC4Q8TAT6 608 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 PIBF1Q8WXW3 757 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 TCEANC2Q96MN5 208 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 MYL10Q9BUA6 226 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 RANBP17Q9H2T7 1088 aaKnown RBP10.46□□□□□ -0.73
SPG11-207ENST00000558138 PNMA2Q9UL42 364 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 RIPK3Q9Y572 518 aa10.46□□□□□ -0.73
SPG11-207ENST00000558138 POTEFA5A3E0 1075 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 DDAH1O94760 285 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 TFRCP02786 760 aaKnown RBP10.45□□□□□ -0.74
SPG11-207ENST00000558138 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
SPG11-207ENST00000558138 CALM1P0DP23 149 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 CALM2P0DP24 149 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 CALM3P0DP25 149 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 SNHG28P0DPA3 235 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 CASTP20810 708 aaKnown RBP10.45□□□□□ -0.74
SPG11-207ENST00000558138 CYP2C19P33261 490 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 HSPA4P34932 840 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 TRIM32Q13049 653 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 GRM4Q14833 912 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 BTNL9Q6UXG8 535 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 DHX32Q7L7V1 743 aaKnown RBP10.45□□□□□ -0.74
SPG11-207ENST00000558138 MICU3Q86XE3 530 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 ADGRF4Q8IZF3 695 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 DEFB118Q96PH6 123 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.45□□□□□ -0.74
SPG11-207ENST00000558138 LY9Q9HBG7 655 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 SENP2Q9HC62 589 aa10.45□□□□□ -0.74
SPG11-207ENST00000558138 PFASO15067 1338 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 RPTORQ8N122 1335 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 COBLO75128 1261 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 TAL1P17542 331 aaPredicted RBP10.44□□□□□ -0.74
SPG11-207ENST00000558138 EN2P19622 333 aaPredicted RBP10.44□□□□□ -0.74
SPG11-207ENST00000558138 RXRAP19793 462 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 CALML3P27482 149 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 CACNB2Q08289 660 aaPredicted RBP10.44□□□□□ -0.74
SPG11-207ENST00000558138 ADCK5Q3MIX3 580 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 FBXO11Q86XK2 927 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 RASEFQ8IZ41 740 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 STAG2Q8N3U4 1231 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 IGDCC4Q8TDY8 1250 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 USP6NLQ92738 828 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 MAML3Q96JK9 1138 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 MTA3Q9BTC8 594 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 GPHNQ9NQX3 736 aaPredicted RBP10.44□□□□□ -0.74
SPG11-207ENST00000558138 FLRT1Q9NZU1 646 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 SEC63Q9UGP8 760 aaKnown RBP10.44□□□□□ -0.74
SPG11-207ENST00000558138 MAD2L2Q9UI95 211 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 CNPY2Q9Y2B0 182 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 SNX14Q9Y5W7 946 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 ZNF236Q9UL36 1845 aa10.44□□□□□ -0.74
SPG11-207ENST00000558138 ZNF536O15090 1300 aa10.43□□□□□ -0.74
SPG11-207ENST00000558138 ABCB11O95342 1321 aa10.43□□□□□ -0.74
SPG11-207ENST00000558138 HOXC6P09630 235 aa10.43□□□□□ -0.74
SPG11-207ENST00000558138 CPA1P15085 419 aa10.43□□□□□ -0.74
SPG11-207ENST00000558138 CCND3P30281 292 aaPredicted RBP10.43□□□□□ -0.74
SPG11-207ENST00000558138 GNAQP50148 359 aa10.43□□□□□ -0.74
SPG11-207ENST00000558138 MLLT1Q03111 559 aaPredicted RBP10.43□□□□□ -0.74
SPG11-207ENST00000558138 QRICH1Q2TAL8 776 aa10.43□□□□□ -0.74
SPG11-207ENST00000558138 MUM1L1Q5H9M0 696 aa10.43□□□□□ -0.74
SPG11-207ENST00000558138 OLFML2BQ68BL8 750 aa10.43□□□□□ -0.74
SPG11-207ENST00000558138 RNF207Q6ZRF8 634 aa10.43□□□□□ -0.74
SPG11-207ENST00000558138 Q6ZUG5 572 aa10.43□□□□□ -0.74
SPG11-207ENST00000558138 U2AF1L4Q8WU68 220 aaKnown RBP10.43□□□□□ -0.74
SPG11-207ENST00000558138 MPHOSPH6Q99547 160 aaKnown RBP10.43□□□□□ -0.74
SPG11-207ENST00000558138 A1CFQ9NQ94 594 aaKnown RBP10.43□□□□□ -0.74
SPG11-207ENST00000558138 ZHX1Q9UKY1 873 aaPredicted RBP10.43□□□□□ -0.74
SPG11-207ENST00000558138 WDR19Q8NEZ3 1342 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 KLF18A0A0U1RQI7 1052 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 GOLGA8AA7E2F4 631 aa10.42□□□□□ -0.74
SPG11-207ENST00000558138 GOLGA8BA8MQT2 603 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms