RNA–Protein interactions for RNA: ENST00000558016.1

IDH3A-204, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-204ENST00000558016 PRICKLE2Q7Z3G6 844 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 PRRT2Q7Z6L0 340 aaPredicted RBP7.58□□□□□ -1.2
IDH3A-204ENST00000558016 ADGRA1Q86SQ6 560 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 ZNF280CQ8ND82 737 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 ZNF384Q8TF68 577 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 NANOS1Q8WY41 292 aaKnown RBP7.58□□□□□ -1.2
IDH3A-204ENST00000558016 COL25A1Q9BXS0 654 aaPredicted RBP7.58□□□□□ -1.2
IDH3A-204ENST00000558016 ARHGAP39Q9C0H5 1083 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 BOLA2Q9H3K6 86 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 ANTXR1Q9H6X2 564 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 PAG1Q9NWQ8 432 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 PALD1Q9ULE6 856 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 AGTPBP1Q9UPW5 1226 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 PTPN22Q9Y2R2 807 aa7.58□□□□□ -1.2
IDH3A-204ENST00000558016 LAMB1P07942 1786 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 USP17L5A8MUK1 530 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 PHF20L1A8MW92 1017 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 MEN1O00255 615 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 SMARCA5O60264 1052 aaPredicted RBP7.57□□□□□ -1.2
IDH3A-204ENST00000558016 IGSF3O75054 1194 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 MBD4O95243 580 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 RHOQP17081 205 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 RAB3GAP1Q15042 981 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 RNF20Q5VTR2 975 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 ZSCAN25Q6NSZ9 544 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 TTC6Q86TZ1 520 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 SH3TC2Q8TF17 1288 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 CABP5Q9NP86 173 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 MCM9Q9NXL9 1143 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 ZBTB21Q9ULJ3 1066 aa7.57□□□□□ -1.2
IDH3A-204ENST00000558016 ZNF532Q9HCE3 1301 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 NAV1Q8NEY1 1877 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 RAD21O60216 631 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 GNRH1P01148 92 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 GH2P01242 217 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 CAP2P40123 477 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 PRMT2P55345 433 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 RRP1P56182 461 aaKnown RBP7.56□□□□□ -1.2
IDH3A-204ENST00000558016 RNFT1Q5M7Z0 435 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 WDR78Q5VTH9 848 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 TMED8Q6PL24 325 aaPredicted RBP7.56□□□□□ -1.2
IDH3A-204ENST00000558016 SV2AQ7L0J3 742 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 ANKRD13CQ8N6S4 541 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 COA7Q96BR5 231 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 EDC3Q96F86 508 aaKnown RBP7.56□□□□□ -1.2
IDH3A-204ENST00000558016 PAGR1Q9BTK6 254 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 SERPINB13Q9UIV8 391 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 AFG3L2Q9Y4W6 797 aa7.56□□□□□ -1.2
IDH3A-204ENST00000558016 GPR37L1O60883 481 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 UBXN2AP68543 259 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 ATP2B2Q01814 1243 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 PRKCZQ05513 592 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 ABCB5Q2M3G0 1257 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 LRRFIP1Q32MZ4 808 aaKnown RBP7.55□□□□□ -1.2
IDH3A-204ENST00000558016 CERKLQ49MI3 558 aaPredicted RBP7.55□□□□□ -1.2
IDH3A-204ENST00000558016 TREML2Q5T2D2 321 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 TSHZ3Q63HK5 1081 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 C17orf99Q6UX52 265 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 FOXP4Q8IVH2 680 aaPredicted RBP7.55□□□□□ -1.2
IDH3A-204ENST00000558016 LCORLQ8N3X6 602 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.55□□□□□ -1.2
IDH3A-204ENST00000558016 SDR42E1Q8WUS8 393 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 ARMT1Q9H993 441 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 ECHDC1Q9NTX5 307 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 SRRDQ9UH36 339 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 ISY1Q9ULR0 285 aaKnown RBP7.55□□□□□ -1.2
IDH3A-204ENST00000558016 SLC45A1Q9Y2W3 748 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 PCDHB11Q9Y5F2 797 aa7.55□□□□□ -1.2
IDH3A-204ENST00000558016 HTTP42858 3142 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 A0A1W2PRU2 124 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 USP17L10C9JJH3 530 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 ERC2O15083 957 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 ATP5JP18859 108 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 GRK4P32298 578 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 SCTRP47872 440 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 GCLCP48506 637 aaPredicted RBP7.54□□□□□ -1.2
IDH3A-204ENST00000558016 RNF144AP50876 292 aaPredicted RBP7.54□□□□□ -1.2
IDH3A-204ENST00000558016 MCCD1P59942 119 aaPredicted RBP7.54□□□□□ -1.2
IDH3A-204ENST00000558016 ERVK-9P63128 1117 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 FAM110CQ1W6H9 321 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 GPAT2Q6NUI2 795 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 SIRT2Q8IXJ6 389 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 ARMC5Q96C12 935 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 ZNF333Q96JL9 665 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 HAUS7Q99871 368 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 FSD1Q9BTV5 496 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 TANGO6Q9C0B7 1094 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 EHD4Q9H223 541 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 SH2D4AQ9H788 454 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 GINM1Q9NU53 330 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 SLC4A4Q9Y6R1 1079 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 ATAD5Q96QE3 1844 aa7.54□□□□□ -1.2
IDH3A-204ENST00000558016 ADGRA2Q96PE1 1338 aa7.53□□□□□ -1.2
IDH3A-204ENST00000558016 ZSWIM8A7E2V4 1837 aa7.53□□□□□ -1.2
IDH3A-204ENST00000558016 C19orf81C9J6K1 198 aa7.53□□□□□ -1.2
IDH3A-204ENST00000558016 ADCY3O60266 1144 aa7.53□□□□□ -1.2
IDH3A-204ENST00000558016 APPP05067 770 aa7.53□□□□□ -1.2
IDH3A-204ENST00000558016 TDO2P48775 406 aa7.53□□□□□ -1.2
IDH3A-204ENST00000558016 RGS19P49795 217 aa7.53□□□□□ -1.2
IDH3A-204ENST00000558016 USP14P54578 494 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 310 ms