RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 NBPF11Q86T75 865 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 CD99L2Q8TCZ2 262 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
SNX6-206ENST00000556162 PNMA2Q9UL42 364 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 TPCN1Q9ULQ1 816 aa16.44■□□□□ 0.22
SNX6-206ENST00000556162 MAPK4P31152 587 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
SNX6-206ENST00000556162 FCGRTP55899 365 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 CCT2P78371 535 aaKnown RBP16.43■□□□□ 0.22
SNX6-206ENST00000556162 CDC37Q16543 378 aaPredicted RBP16.43■□□□□ 0.22
SNX6-206ENST00000556162 WDR78Q5VTH9 848 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 TMTC3Q6ZXV5 915 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 NOL8Q76FK4 1167 aaKnown RBP16.43■□□□□ 0.22
SNX6-206ENST00000556162 NCAPG2Q86XI2 1143 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 CMTR1Q8N1G2 835 aaKnown RBP16.43■□□□□ 0.22
SNX6-206ENST00000556162 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
SNX6-206ENST00000556162 SHCBP1Q8NEM2 672 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 PORCNQ9H237 461 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 EFCC1Q9HA90 598 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 PARP14Q460N5 1801 aa16.43■□□□□ 0.22
SNX6-206ENST00000556162 ZNF536O15090 1300 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 CYTH3O43739 400 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 ICAM1P05362 532 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 ERCC3P19447 782 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 CDC27P30260 824 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 COPB2P35606 906 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 STK3Q13188 491 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 AGBL1Q96MI9 1066 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 SLKQ9H2G2 1235 aaPredicted RBP16.42■□□□□ 0.22
SNX6-206ENST00000556162 MROH8Q9H579 483 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 FAM217BQ9NTX9 383 aaPredicted RBP16.42■□□□□ 0.22
SNX6-206ENST00000556162 TNPO2O14787 897 aaKnown RBP16.42■□□□□ 0.22
SNX6-206ENST00000556162 ZBTB5O15062 677 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 SLC35G1Q2M3R5 365 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 HOMER1Q86YM7 354 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 MTMR8Q96EF0 704 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 RRP36Q96EU6 259 aaKnown RBP16.42■□□□□ 0.22
SNX6-206ENST00000556162 PIGSQ96S52 555 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 ARHGAP39Q9C0H5 1083 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 PRDM10Q9NQV6 1147 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 CCPG1Q9ULG6 757 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 LIMCH1Q9UPQ0 1083 aa16.42■□□□□ 0.22
SNX6-206ENST00000556162 NID2Q14112 1375 aa16.41■□□□□ 0.22
SNX6-206ENST00000556162 GNRH1P01148 92 aa16.41■□□□□ 0.22
SNX6-206ENST00000556162 HOXD10P28358 340 aa16.41■□□□□ 0.22
SNX6-206ENST00000556162 QRICH1Q2TAL8 776 aa16.41■□□□□ 0.22
SNX6-206ENST00000556162 PIBF1Q8WXW3 757 aa16.41■□□□□ 0.22
SNX6-206ENST00000556162 COA7Q96BR5 231 aa16.41■□□□□ 0.22
SNX6-206ENST00000556162 TRIM47Q96LD4 638 aa16.41■□□□□ 0.22
SNX6-206ENST00000556162 RIPK3Q9Y572 518 aa16.41■□□□□ 0.22
SNX6-206ENST00000556162 A0A0G2JMZ2 1700 aa16.41■□□□□ 0.22
SNX6-206ENST00000556162 PNMA6FA0A0J9YX94 578 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 CPLX1O14810 134 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 PFKFB2O60825 505 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 ALAS1P13196 640 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 CTGFP29279 349 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 GPR142Q7Z601 462 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 PLEKHH3Q7Z736 793 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 FBXO11Q86XK2 927 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 NCOA5Q9HCD5 579 aaKnown RBP16.4■□□□□ 0.22
SNX6-206ENST00000556162 SEC63Q9UGP8 760 aaKnown RBP16.4■□□□□ 0.22
SNX6-206ENST00000556162 FBXO40Q9UH90 709 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 IVNS1ABPQ9Y6Y0 642 aa16.4■□□□□ 0.22
SNX6-206ENST00000556162 TRAF1Q13077 416 aa16.39■□□□□ 0.22
SNX6-206ENST00000556162 ME3Q16798 604 aa16.39■□□□□ 0.22
SNX6-206ENST00000556162 CPLX2Q6PUV4 134 aaKnown RBP16.39■□□□□ 0.22
SNX6-206ENST00000556162 CHST13Q8NET6 341 aa16.39■□□□□ 0.22
SNX6-206ENST00000556162 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.22
SNX6-206ENST00000556162 AMNQ9BXJ7 453 aa16.39■□□□□ 0.22
SNX6-206ENST00000556162 HOMER2Q9NSB8 354 aa16.39■□□□□ 0.22
SNX6-206ENST00000556162 STRNO43815 780 aa16.39■□□□□ 0.21
SNX6-206ENST00000556162 CAP1Q01518 475 aa16.39■□□□□ 0.21
SNX6-206ENST00000556162 USH1GQ495M9 461 aa16.39■□□□□ 0.21
SNX6-206ENST00000556162 ZSCAN31Q96LW9 406 aaPredicted RBP16.39■□□□□ 0.21
SNX6-206ENST00000556162 RNF146Q9NTX7 359 aa16.39■□□□□ 0.21
SNX6-206ENST00000556162 TRIM17Q9Y577 477 aa16.39■□□□□ 0.21
SNX6-206ENST00000556162 V9GY48 417 aaPredicted RBP16.39■□□□□ 0.21
SNX6-206ENST00000556162 COL11A1P12107 1806 aaPredicted RBP16.39■□□□□ 0.21
SNX6-206ENST00000556162 FCER1AP12319 257 aa16.38■□□□□ 0.21
SNX6-206ENST00000556162 FUT2Q10981 343 aa16.38■□□□□ 0.21
SNX6-206ENST00000556162 SCRN1Q12765 414 aa16.38■□□□□ 0.21
SNX6-206ENST00000556162 ACAD9Q9H845 621 aa16.38■□□□□ 0.21
SNX6-206ENST00000556162 CASP8AP2Q9UKL3 1982 aa16.38■□□□□ 0.21
SNX6-206ENST00000556162 BAZ2BQ9UIF8 2168 aaKnown RBP16.38■□□□□ 0.21
SNX6-206ENST00000556162 IFNAR1P17181 557 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 PTPREP23469 700 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 MCM2P49736 904 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 AKAP17AQ02040 695 aaKnown RBP16.37■□□□□ 0.21
SNX6-206ENST00000556162 KCTD2Q14681 263 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 NTRK3Q16288 839 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 OTOP1Q7RTM1 612 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 PCDHA1Q9Y5I3 950 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 ABCB11O95342 1321 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 hCG_1642624A0A1W2PR95 340 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 SLC15A5A6NIM6 579 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms