RNA–Protein interactions for RNA: ENST00000553699.5

GSKIP-202, Transcript of GSK3B interacting protein, humanhuman

TSL 4

Gene GSKIP, Length 501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-202ENST00000553699 ST18O60284 1047 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 COBLO75128 1261 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 ZBED4O75132 1171 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 IGHA2P01877 340 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 FDX1P10109 184 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 PCP11498 1178 aaKnown RBP11.33□□□□□ -0.6
GSKIP-202ENST00000553699 CYBAP13498 195 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 CNGA1P29973 690 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 SLC1A4P43007 532 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 IRX6P78412 446 aaPredicted RBP11.33□□□□□ -0.6
GSKIP-202ENST00000553699 IKQ13123 557 aaPredicted RBP11.33□□□□□ -0.6
GSKIP-202ENST00000553699 LHX8Q68G74 356 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.6
GSKIP-202ENST00000553699 FAM160B2Q86V87 743 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 MAML3Q96JK9 1138 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 SLC38A10Q9HBR0 1119 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 IL17RBQ9NRM6 502 aa11.33□□□□□ -0.6
GSKIP-202ENST00000553699 DDX20Q9UHI6 824 aaKnown RBP11.33□□□□□ -0.6
GSKIP-202ENST00000553699 LAMA4Q16363 1823 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 CDH23Q9H251 3354 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 NMT2O60551 498 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 BMP1P13497 986 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 OAZ1P54368 228 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 HAND2P61296 217 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 GRIN2CQ14957 1233 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 RRP12Q5JTH9 1297 aaKnown RBP11.32□□□□□ -0.6
GSKIP-202ENST00000553699 CWC27Q6UX04 472 aaKnown RBP11.32□□□□□ -0.6
GSKIP-202ENST00000553699 CPXCR1Q8N123 301 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 STAG1Q8WVM7 1258 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 RNF41Q9H4P4 317 aaPredicted RBP11.32□□□□□ -0.6
GSKIP-202ENST00000553699 C11orf16Q9NQ32 467 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 INCENPQ9NQS7 918 aa11.32□□□□□ -0.6
GSKIP-202ENST00000553699 DIS3Q9Y2L1 958 aaKnown RBP11.32□□□□□ -0.6
GSKIP-202ENST00000553699 TMEM232C9JQI7 657 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 SEPT4O43236 478 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 PGK2P07205 417 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 NOVP48745 357 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 NT5C2P49902 561 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 SHHQ15465 462 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 AKNAD1Q5T1N1 836 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 MFSD6Q6ZSS7 791 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 TRPV1Q8NER1 839 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 CHURC1Q8WUH1 139 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 RAVER2Q9HCJ3 691 aaKnown RBP11.31□□□□□ -0.6
GSKIP-202ENST00000553699 FBXO40Q9UH90 709 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 NRBP1Q9UHY1 535 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 TACC3Q9Y6A5 838 aa11.31□□□□□ -0.6
GSKIP-202ENST00000553699 DNM1LO00429 736 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 ZNF213O14771 459 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 PLA2G6O60733 806 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
GSKIP-202ENST00000553699 COL6A1P12109 1028 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 MCCP23508 829 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 PDE4AP27815 886 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 SLC4A3P48751 1232 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 ZNF792Q3KQV3 632 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 TTC22Q5TAA0 569 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 RCSD1Q6JBY9 416 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 KCTD1Q719H9 257 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
GSKIP-202ENST00000553699 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 CHST13Q8NET6 341 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 DCAF4Q8WV16 495 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 ESR2Q92731 530 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 COL26A1Q96A83 441 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 DDX11Q96FC9 970 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 DSCC1Q9BVC3 393 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 TCP11L1Q9NUJ3 509 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 PFASO15067 1338 aa11.3□□□□□ -0.6
GSKIP-202ENST00000553699 DNAJC25-GNG10A0A024R161 153 aa11.29□□□□□ -0.6
GSKIP-202ENST00000553699 FAM86C2PA6NEL3 165 aa11.29□□□□□ -0.6
GSKIP-202ENST00000553699 GSPT1P15170 499 aaKnown RBP11.29□□□□□ -0.6
GSKIP-202ENST00000553699 IMMTQ16891 758 aaKnown RBP11.29□□□□□ -0.6
GSKIP-202ENST00000553699 ANKRD35Q8N283 1001 aa11.29□□□□□ -0.6
GSKIP-202ENST00000553699 MSL3Q8N5Y2 521 aaKnown RBP11.29□□□□□ -0.6
GSKIP-202ENST00000553699 TINF2Q9BSI4 451 aa11.29□□□□□ -0.6
GSKIP-202ENST00000553699 KCNH6Q9H252 994 aa11.29□□□□□ -0.6
GSKIP-202ENST00000553699 MTMR7Q9Y216 660 aa11.29□□□□□ -0.6
GSKIP-202ENST00000553699 PLXNA1Q9UIW2 1896 aa11.29□□□□□ -0.6
GSKIP-202ENST00000553699 NEDD4P46934 1319 aa11.29□□□□□ -0.6
GSKIP-202ENST00000553699 RAD50Q92878 1312 aa11.29□□□□□ -0.6
GSKIP-202ENST00000553699 KBTBD13C9JR72 458 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 TKFCQ3LXA3 575 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 PRAMEF19Q5SWL8 479 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 RASGRP2Q7LDG7 609 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
GSKIP-202ENST00000553699 ARRDC4Q8NCT1 418 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 CHMP4CQ96CF2 233 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 TTC14Q96N46 770 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 GAS2L1Q99501 681 aaPredicted RBP11.28□□□□□ -0.6
GSKIP-202ENST00000553699 TMEM47Q9BQJ4 181 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
GSKIP-202ENST00000553699 ACAD9Q9H845 621 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 HOMER2Q9NSB8 354 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 CTNNA3Q9UI47 895 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 PRR12Q9ULL5 1215 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 CNPY2Q9Y2B0 182 aa11.28□□□□□ -0.6
GSKIP-202ENST00000553699 PRR33A8MZF0 331 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms