RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
DDX54-210ENST00000552375 MYH6P13533 1939 aa16.5■□□□□ 0.23
DDX54-210ENST00000552375 ZNF536O15090 1300 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 KBTBD13C9JR72 458 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 SGSM2O43147 1006 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 TOP1P11387 765 aaKnown RBP16.49■□□□□ 0.23
DDX54-210ENST00000552375 SLC4A3P48751 1232 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 NT5C2P49902 561 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 CCDC96Q2M329 555 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 BMP2KLQ5H9B9 411 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 GJC2Q5T442 439 aaPredicted RBP16.49■□□□□ 0.23
DDX54-210ENST00000552375 RCSD1Q6JBY9 416 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 ZNF467Q7Z7K2 595 aaPredicted RBP16.49■□□□□ 0.23
DDX54-210ENST00000552375 SENP6Q9GZR1 1112 aaPredicted RBP16.49■□□□□ 0.23
DDX54-210ENST00000552375 ACAD9Q9H845 621 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
DDX54-210ENST00000552375 ZNF865P0CJ78 1059 aaPredicted RBP16.48■□□□□ 0.23
DDX54-210ENST00000552375 RARBP10826 455 aa16.48■□□□□ 0.23
DDX54-210ENST00000552375 AKR1A1P14550 325 aa16.48■□□□□ 0.23
DDX54-210ENST00000552375 TAL1P17542 331 aaPredicted RBP16.48■□□□□ 0.23
DDX54-210ENST00000552375 IMMTQ16891 758 aaKnown RBP16.48■□□□□ 0.23
DDX54-210ENST00000552375 MAMDC4Q6UXC1 1216 aa16.48■□□□□ 0.23
DDX54-210ENST00000552375 ANKRD35Q8N283 1001 aa16.48■□□□□ 0.23
DDX54-210ENST00000552375 FGD4Q96M96 766 aa16.48■□□□□ 0.23
DDX54-210ENST00000552375 GDF15Q99988 308 aa16.48■□□□□ 0.23
DDX54-210ENST00000552375 TMEM47Q9BQJ4 181 aa16.48■□□□□ 0.23
DDX54-210ENST00000552375 ZKSCAN3Q9BRR0 538 aa16.48■□□□□ 0.23
DDX54-210ENST00000552375 RNF146Q9NTX7 359 aa16.48■□□□□ 0.23
DDX54-210ENST00000552375 PRR12Q9ULL5 1215 aa16.48■□□□□ 0.23
DDX54-210ENST00000552375 B4E1Z4 1266 aa16.47■□□□□ 0.23
DDX54-210ENST00000552375 SYN1P17600 705 aa16.47■□□□□ 0.23
DDX54-210ENST00000552375 LRRC41Q15345 812 aa16.47■□□□□ 0.23
DDX54-210ENST00000552375 TKFCQ3LXA3 575 aa16.47■□□□□ 0.23
DDX54-210ENST00000552375 ESR2Q92731 530 aa16.47■□□□□ 0.23
DDX54-210ENST00000552375 AGBL1Q96MI9 1066 aa16.47■□□□□ 0.23
DDX54-210ENST00000552375 ESYT1Q9BSJ8 1104 aa16.47■□□□□ 0.23
DDX54-210ENST00000552375 A1CFQ9NQ94 594 aaKnown RBP16.47■□□□□ 0.23
DDX54-210ENST00000552375 XPNPEP3Q9NQH7 507 aa16.47■□□□□ 0.23
DDX54-210ENST00000552375 SNAI1O95863 264 aaPredicted RBP16.46■□□□□ 0.23
DDX54-210ENST00000552375 MAGEA10P43363 369 aaPredicted RBP16.46■□□□□ 0.23
DDX54-210ENST00000552375 ATN1P54259 1190 aaPredicted RBP16.46■□□□□ 0.23
DDX54-210ENST00000552375 CCDC174Q6PII3 467 aa16.46■□□□□ 0.23
DDX54-210ENST00000552375 BTNL9Q6UXG8 535 aa16.46■□□□□ 0.23
DDX54-210ENST00000552375 LENG1Q96BZ8 264 aaPredicted RBP16.46■□□□□ 0.23
DDX54-210ENST00000552375 TTC14Q96N46 770 aa16.46■□□□□ 0.23
DDX54-210ENST00000552375 RANBP17Q9H2T7 1088 aaKnown RBP16.46■□□□□ 0.23
DDX54-210ENST00000552375 CTNNA3Q9UI47 895 aa16.46■□□□□ 0.23
DDX54-210ENST00000552375 ZHX1Q9UKY1 873 aaPredicted RBP16.46■□□□□ 0.23
DDX54-210ENST00000552375 TAF6LQ9Y6J9 622 aa16.46■□□□□ 0.23
DDX54-210ENST00000552375 DNAH12Q6ZR08 3092 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 KDM4AO75164 1064 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
DDX54-210ENST00000552375 SNHG28P0DPA3 235 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 PDHBP11177 359 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 BMP8BP34820 402 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 RTP1P59025 263 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 SNX17Q15036 470 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 SYDE2Q5VT97 1194 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 RNF180Q86T96 592 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 FAM133AQ8N9E0 248 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.45■□□□□ 0.22
DDX54-210ENST00000552375 CCPG1Q9ULG6 757 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 RBM8AQ9Y5S9 174 aaKnown RBP16.45■□□□□ 0.22
DDX54-210ENST00000552375 SMCHD1A6NHR9 2005 aa16.45■□□□□ 0.22
DDX54-210ENST00000552375 FRMPD2Q68DX3 1309 aaPredicted RBP16.45■□□□□ 0.22
DDX54-210ENST00000552375 POTEB2H3BUK9 544 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 ADAMTS4O75173 837 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 CDC45O75419 566 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 PGK1P00558 417 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 ICAM1P05362 532 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 ALAS1P13196 640 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 SNAP25P60880 206 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 ZNF543Q08ER8 600 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 TTBK2Q6IQ55 1244 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 ARMCX2Q7L311 632 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 ANO2Q9NQ90 1003 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 FAM184BQ9ULE4 1060 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 PHF24Q9UPV7 400 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
DDX54-210ENST00000552375 SYNRGQ9UMZ2 1314 aa16.44■□□□□ 0.22
DDX54-210ENST00000552375 CYP21A2P08686 494 aa16.43■□□□□ 0.22
DDX54-210ENST00000552375 SLC16A2P36021 539 aa16.43■□□□□ 0.22
DDX54-210ENST00000552375 CNTN2Q02246 1040 aa16.43■□□□□ 0.22
DDX54-210ENST00000552375 ACVR2BQ13705 512 aa16.43■□□□□ 0.22
DDX54-210ENST00000552375 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
DDX54-210ENST00000552375 IQCA1Q86XH1 822 aa16.43■□□□□ 0.22
DDX54-210ENST00000552375 DGKHQ86XP1 1220 aa16.43■□□□□ 0.22
DDX54-210ENST00000552375 LSG1Q9H089 658 aaKnown RBP16.43■□□□□ 0.22
DDX54-210ENST00000552375 ABHD16BQ9H3Z7 469 aa16.43■□□□□ 0.22
DDX54-210ENST00000552375 ADCYAP1R1P41586 468 aa16.42■□□□□ 0.22
DDX54-210ENST00000552375 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
DDX54-210ENST00000552375 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
DDX54-210ENST00000552375 C1orf53Q5VUE5 145 aa16.42■□□□□ 0.22
DDX54-210ENST00000552375 ERICH6BQ5W0A0 696 aa16.42■□□□□ 0.22
DDX54-210ENST00000552375 SLC39A5Q6ZMH5 540 aa16.42■□□□□ 0.22
DDX54-210ENST00000552375 CCDC144CPQ8IYA2 1237 aa16.42■□□□□ 0.22
DDX54-210ENST00000552375 KATNBL1Q9H079 304 aa16.42■□□□□ 0.22
DDX54-210ENST00000552375 GPCPD1Q9NPB8 672 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms