RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 DCAF4Q8WV16 495 aa17.65■□□□□ 0.42
RAB40B-202ENST00000538809 RNF146Q9NTX7 359 aa17.65■□□□□ 0.42
RAB40B-202ENST00000538809 PRR12Q9ULL5 1215 aa17.65■□□□□ 0.42
RAB40B-202ENST00000538809 KBTBD13C9JR72 458 aa17.64■□□□□ 0.41
RAB40B-202ENST00000538809 ZNF213O14771 459 aa17.64■□□□□ 0.41
RAB40B-202ENST00000538809 FDX1P10109 184 aa17.64■□□□□ 0.41
RAB40B-202ENST00000538809 TOP1P11387 765 aaKnown RBP17.64■□□□□ 0.41
RAB40B-202ENST00000538809 SLC16A2P36021 539 aa17.64■□□□□ 0.41
RAB40B-202ENST00000538809 TTBK2Q6IQ55 1244 aa17.64■□□□□ 0.41
RAB40B-202ENST00000538809 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.64■□□□□ 0.41
RAB40B-202ENST00000538809 FGD4Q96M96 766 aa17.64■□□□□ 0.41
RAB40B-202ENST00000538809 ZKSCAN3Q9BRR0 538 aa17.64■□□□□ 0.41
RAB40B-202ENST00000538809 TCP11L1Q9NUJ3 509 aa17.64■□□□□ 0.41
RAB40B-202ENST00000538809 FBXO40Q9UH90 709 aa17.64■□□□□ 0.41
RAB40B-202ENST00000538809 PLA2G6O60733 806 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 ZNF865P0CJ78 1059 aaPredicted RBP17.63■□□□□ 0.41
RAB40B-202ENST00000538809 ALAS1P13196 640 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 LRRC41Q15345 812 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 ARRDC4Q8NCT1 418 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 DSCC1Q9BVC3 393 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 RNF41Q9H4P4 317 aaPredicted RBP17.63■□□□□ 0.41
RAB40B-202ENST00000538809 ACAD9Q9H845 621 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 GPCPD1Q9NPB8 672 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 XPNPEP3Q9NQH7 507 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 NRBP1Q9UHY1 535 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 ZHX1Q9UKY1 873 aaPredicted RBP17.63■□□□□ 0.41
RAB40B-202ENST00000538809 CNPY2Q9Y2B0 182 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 SYNGAP1Q96PV0 1343 aa17.63■□□□□ 0.41
RAB40B-202ENST00000538809 SNAI1O95863 264 aaPredicted RBP17.62■□□□□ 0.41
RAB40B-202ENST00000538809 PGK1P00558 417 aa17.62■□□□□ 0.41
RAB40B-202ENST00000538809 RARBP10826 455 aa17.62■□□□□ 0.41
RAB40B-202ENST00000538809 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
RAB40B-202ENST00000538809 AKR1A1P14550 325 aa17.62■□□□□ 0.41
RAB40B-202ENST00000538809 CNTN2Q02246 1040 aa17.62■□□□□ 0.41
RAB40B-202ENST00000538809 ESR2Q92731 530 aa17.62■□□□□ 0.41
RAB40B-202ENST00000538809 TRERF1Q96PN7 1200 aa17.62■□□□□ 0.41
RAB40B-202ENST00000538809 A1CFQ9NQ94 594 aaKnown RBP17.62■□□□□ 0.41
RAB40B-202ENST00000538809 KDM4AO75164 1064 aa17.61■□□□□ 0.41
RAB40B-202ENST00000538809 PDHBP11177 359 aa17.61■□□□□ 0.41
RAB40B-202ENST00000538809 MAGEA10P43363 369 aaPredicted RBP17.61■□□□□ 0.41
RAB40B-202ENST00000538809 RTP1P59025 263 aa17.61■□□□□ 0.41
RAB40B-202ENST00000538809 MUM1L1Q5H9M0 696 aa17.61■□□□□ 0.41
RAB40B-202ENST00000538809 SYDE2Q5VT97 1194 aa17.61■□□□□ 0.41
RAB40B-202ENST00000538809 MAMDC4Q6UXC1 1216 aa17.61■□□□□ 0.41
RAB40B-202ENST00000538809 MSL3Q8N5Y2 521 aaKnown RBP17.61■□□□□ 0.41
RAB40B-202ENST00000538809 FERMT2Q96AC1 680 aa17.61■□□□□ 0.41
RAB40B-202ENST00000538809 GDF15Q99988 308 aa17.61■□□□□ 0.41
RAB40B-202ENST00000538809 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.61■□□□□ 0.41
RAB40B-202ENST00000538809 CCPG1Q9ULG6 757 aa17.61■□□□□ 0.41
RAB40B-202ENST00000538809 RAD50Q92878 1312 aa17.61■□□□□ 0.41
RAB40B-202ENST00000538809 B4E1Z4 1266 aa17.6■□□□□ 0.41
RAB40B-202ENST00000538809 POTEB2H3BUK9 544 aa17.6■□□□□ 0.41
RAB40B-202ENST00000538809 ADCYAP1R1P41586 468 aa17.6■□□□□ 0.41
RAB40B-202ENST00000538809 TKFCQ3LXA3 575 aa17.6■□□□□ 0.41
RAB40B-202ENST00000538809 ARMCX2Q7L311 632 aa17.6■□□□□ 0.41
RAB40B-202ENST00000538809 ZNF467Q7Z7K2 595 aaPredicted RBP17.6■□□□□ 0.41
RAB40B-202ENST00000538809 RANBP17Q9H2T7 1088 aaKnown RBP17.6■□□□□ 0.41
RAB40B-202ENST00000538809 ATP11BQ9Y2G3 1177 aa17.6■□□□□ 0.41
RAB40B-202ENST00000538809 SYNRGQ9UMZ2 1314 aa17.59■□□□□ 0.41
RAB40B-202ENST00000538809 ADCY6O43306 1168 aa17.59■□□□□ 0.41
RAB40B-202ENST00000538809 CHMLP26374 656 aa17.59■□□□□ 0.41
RAB40B-202ENST00000538809 IMMTQ16891 758 aaKnown RBP17.59■□□□□ 0.41
RAB40B-202ENST00000538809 BTNL9Q6UXG8 535 aa17.59■□□□□ 0.41
RAB40B-202ENST00000538809 CCDC144CPQ8IYA2 1237 aa17.59■□□□□ 0.41
RAB40B-202ENST00000538809 FAM133AQ8N9E0 248 aa17.59■□□□□ 0.41
RAB40B-202ENST00000538809 DDX49Q9Y6V7 483 aaKnown RBP17.59■□□□□ 0.41
RAB40B-202ENST00000538809 SZT2Q5T011 3432 aa17.59■□□□□ 0.41
RAB40B-202ENST00000538809 ASTN1O14525 1302 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 SOWAHBA6NEL2 793 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 ICAM1P05362 532 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 NT5C2P49902 561 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 MDM2Q00987 491 aaPredicted RBP17.58■□□□□ 0.4
RAB40B-202ENST00000538809 ZNF543Q08ER8 600 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 ACVR2BQ13705 512 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 TRIM60Q495X7 471 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 NSMFQ6X4W1 530 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 SLC39A5Q6ZMH5 540 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 RNF180Q86T96 592 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 TTC14Q96N46 770 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 FAM184BQ9ULE4 1060 aa17.58■□□□□ 0.4
RAB40B-202ENST00000538809 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
RAB40B-202ENST00000538809 KIAA1217Q5T5P2 1943 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 A0A1W2PPC1 479 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 ADAMTS4O75173 837 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 GOLGA8HP0CJ92 632 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 SNHG28P0DPA3 235 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 IRX5P78411 483 aaPredicted RBP17.57■□□□□ 0.4
RAB40B-202ENST00000538809 IQCA1Q86XH1 822 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 PURBQ96QR8 312 aaKnown RBP17.57■□□□□ 0.4
RAB40B-202ENST00000538809 CPVLQ9H3G5 476 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 CYP39A1Q9NYL5 469 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 CTNNA3Q9UI47 895 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 PHF24Q9UPV7 400 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 LAMA3Q16787 3333 aa17.57■□□□□ 0.4
RAB40B-202ENST00000538809 TNKSO95271 1327 aa17.56■□□□□ 0.4
RAB40B-202ENST00000538809 MYADML2A6NDP7 307 aa17.56■□□□□ 0.4
RAB40B-202ENST00000538809 SOX1O00570 391 aaPredicted RBP17.56■□□□□ 0.4
RAB40B-202ENST00000538809 NFIBO00712 420 aa17.56■□□□□ 0.4
RAB40B-202ENST00000538809 BMP8BP34820 402 aa17.56■□□□□ 0.4
RAB40B-202ENST00000538809 SNX17Q15036 470 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms