RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 SNAP25P60880 206 aa9.89□□□□□ -0.83
DDB1-208ENST00000537120 LRRC41Q15345 812 aa9.89□□□□□ -0.83
DDB1-208ENST00000537120 SMC5Q8IY18 1101 aa9.89□□□□□ -0.83
DDB1-208ENST00000537120 MSL3Q8N5Y2 521 aaKnown RBP9.89□□□□□ -0.83
DDB1-208ENST00000537120 GMCL1Q96IK5 515 aa9.89□□□□□ -0.83
DDB1-208ENST00000537120 TRERF1Q96PN7 1200 aa9.89□□□□□ -0.83
DDB1-208ENST00000537120 GDF15Q99988 308 aa9.89□□□□□ -0.83
DDB1-208ENST00000537120 RNF41Q9H4P4 317 aaPredicted RBP9.89□□□□□ -0.83
DDB1-208ENST00000537120 GPCPD1Q9NPB8 672 aa9.89□□□□□ -0.83
DDB1-208ENST00000537120 ANAPC4Q9UJX5 808 aa9.89□□□□□ -0.83
DDB1-208ENST00000537120 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.89□□□□□ -0.83
DDB1-208ENST00000537120 COL11A1P12107 1806 aaPredicted RBP9.89□□□□□ -0.83
DDB1-208ENST00000537120 CCDC171Q6TFL3 1326 aa9.88□□□□□ -0.83
DDB1-208ENST00000537120 TOP1P11387 765 aaKnown RBP9.88□□□□□ -0.83
DDB1-208ENST00000537120 NUCB1Q02818 461 aa9.88□□□□□ -0.83
DDB1-208ENST00000537120 TKFCQ3LXA3 575 aa9.88□□□□□ -0.83
DDB1-208ENST00000537120 CWC27Q6UX04 472 aaKnown RBP9.88□□□□□ -0.83
DDB1-208ENST00000537120 PLEKHM2Q8IWE5 1019 aa9.88□□□□□ -0.83
DDB1-208ENST00000537120 DCAF4Q8WV16 495 aa9.88□□□□□ -0.83
DDB1-208ENST00000537120 AGBL1Q96MI9 1066 aa9.88□□□□□ -0.83
DDB1-208ENST00000537120 PRO3102Q9H379 93 aa9.88□□□□□ -0.83
DDB1-208ENST00000537120 ACAD9Q9H845 621 aa9.88□□□□□ -0.83
DDB1-208ENST00000537120 IL17RBQ9NRM6 502 aa9.88□□□□□ -0.83
DDB1-208ENST00000537120 RNF146Q9NTX7 359 aa9.88□□□□□ -0.83
DDB1-208ENST00000537120 IGHA2P01877 340 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 ZNF865P0CJ78 1059 aaPredicted RBP9.87□□□□□ -0.83
DDB1-208ENST00000537120 SLC16A2P36021 539 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 ACVR2BQ13705 512 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 AKNAD1Q5T1N1 836 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 NSMFQ6X4W1 530 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 ZNF467Q7Z7K2 595 aaPredicted RBP9.87□□□□□ -0.83
DDB1-208ENST00000537120 ZNF589Q86UQ0 364 aaPredicted RBP9.87□□□□□ -0.83
DDB1-208ENST00000537120 TDHQ8IZJ6 230 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 ESR2Q92731 530 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 ABHD16BQ9H3Z7 469 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.87□□□□□ -0.83
DDB1-208ENST00000537120 CCPG1Q9ULG6 757 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 PRR12Q9ULL5 1215 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 PLIN4Q96Q06 1357 aa9.87□□□□□ -0.83
DDB1-208ENST00000537120 SYNGAP1Q96PV0 1343 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 ALPK3Q96L96 1907 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 DNAJC25-GNG10A0A024R161 153 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 ASB14A6NK59 587 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 FOXP2O15409 715 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 PLA2G6O60733 806 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 EIF5BO60841 1220 aaKnown RBP9.86□□□□□ -0.83
DDB1-208ENST00000537120 SNAI1O95863 264 aaPredicted RBP9.86□□□□□ -0.83
DDB1-208ENST00000537120 C6orf222P0C671 652 aaPredicted RBP9.86□□□□□ -0.83
DDB1-208ENST00000537120 PCP11498 1178 aaKnown RBP9.86□□□□□ -0.83
DDB1-208ENST00000537120 CNTN2Q02246 1040 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 TLE2Q04725 743 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 TRIM60Q495X7 471 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 CCDC178Q5BJE1 867 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 SYDE2Q5VT97 1194 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 MAMDC4Q6UXC1 1216 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 NUP133Q8WUM0 1156 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 LRCH3Q96II8 777 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 TTC14Q96N46 770 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 TMEM47Q9BQJ4 181 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 OSBPL3Q9H4L5 887 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 TCP11L1Q9NUJ3 509 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 CTNNA3Q9UI47 895 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 PHF24Q9UPV7 400 aa9.86□□□□□ -0.83
DDB1-208ENST00000537120 FRMPD2Q68DX3 1309 aaPredicted RBP9.85□□□□□ -0.83
DDB1-208ENST00000537120 PLXNA1Q9UIW2 1896 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 A0A0G2JMZ2 1700 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 PARP14Q460N5 1801 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 ZNF236Q9UL36 1845 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 DCDC2CA8MYV0 355 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 PQBP1O60828 265 aaKnown RBP9.85□□□□□ -0.83
DDB1-208ENST00000537120 DUSP11O75319 330 aaKnown RBP9.85□□□□□ -0.83
DDB1-208ENST00000537120 FGRP09769 529 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 IRX6P78412 446 aaPredicted RBP9.85□□□□□ -0.83
DDB1-208ENST00000537120 KCNA10Q16322 511 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 IMMTQ16891 758 aaKnown RBP9.85□□□□□ -0.83
DDB1-208ENST00000537120 CCDC144BQ3MJ40 725 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 GNASQ5JWF2 1037 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 TTBK2Q6IQ55 1244 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 ARMCX2Q7L311 632 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 IQCA1Q86XH1 822 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 CCDC144CPQ8IYA2 1237 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 PCSK9Q8NBP7 692 aaKnown RBP9.85□□□□□ -0.83
DDB1-208ENST00000537120 LENG1Q96BZ8 264 aaPredicted RBP9.85□□□□□ -0.83
DDB1-208ENST00000537120 GLT1D1Q96MS3 346 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 ZKSCAN3Q9BRR0 538 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 TSEN34Q9BSV6 310 aaKnown RBP9.85□□□□□ -0.83
DDB1-208ENST00000537120 AP5M1Q9H0R1 490 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 A1CFQ9NQ94 594 aaKnown RBP9.85□□□□□ -0.83
DDB1-208ENST00000537120 STARD7Q9NQZ5 370 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 TMEM39AQ9NV64 488 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 TACC3Q9Y6A5 838 aa9.85□□□□□ -0.83
DDB1-208ENST00000537120 GREB1LQ9C091 1923 aaPredicted RBP9.84□□□□□ -0.83
DDB1-208ENST00000537120 PTPDC1A2A3K4 754 aa9.84□□□□□ -0.83
DDB1-208ENST00000537120 SOX1O00570 391 aaPredicted RBP9.84□□□□□ -0.83
DDB1-208ENST00000537120 DHX16O60231 1041 aaKnown RBP9.84□□□□□ -0.83
DDB1-208ENST00000537120 ICAM1P05362 532 aa9.84□□□□□ -0.83
DDB1-208ENST00000537120 RAG1P15918 1043 aa9.84□□□□□ -0.83
DDB1-208ENST00000537120 ACLYP53396 1101 aa9.84□□□□□ -0.83
DDB1-208ENST00000537120 TNFAIP2Q03169 654 aa9.84□□□□□ -0.83
DDB1-208ENST00000537120 EEPD1Q7L9B9 569 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms